Gene Namu_1876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1876 
Symbol 
ID8447483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp2061405 
End bp2062172 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content73% 
IMG OID645041006 
Productamidohydrolase 2 
Protein accessionYP_003201254 
Protein GI258652098 
COG category[R] General function prediction only 
COG ID[COG3618] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0123209 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0185409 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCAGC CGATCTTCGA CAGCCATCTG CACATCATCG ATCCGGCGTT CCCGCTGGTC 
GCCAACCATG GCTACCGGCC GCCGCCGTTC ACCGCGGCCG AGTACCGGGC GGCGGTCGCC
GCGCTGCCGA TCGTCGGCGG CAGCGTCGTC TCCGGCTCGT TCCAGGCCTT CGACGTCGGT
TACCTGCGGG CGGCGCTGAC GGCGCTCGGT CCGGGCTTCG TCGGCGTGGC CAACGTCCCG
GCCCAGGCCA CCGACGCCGA CCTGATCGAC CTCGCGCACA GCGGTGTCCG GGGAGTGCGC
TTCAACCTGT TCCGCGGGGG CAGCGAATCG GTGGCCGCGC TGACCACGTT CGGCCAGCGG
GCCTGGGCGG TGGCCCGGCT GCACATCGAG CTCTACCTGG ACGCGGCCGA TCTCGACCAG
CTGGCCGATC CGATCGGCCG GCTGCCGCGA GTCAGCATCG ACCACCTCGG GCTGACCGCG
GCCCACCGCC CGACGCTGCT GGCGCTGGCC GAGGCCGGGG TGCGGATCAA GGCCACCGGC
TTCGGCCGGG TCGAGCTGGA CGTGCCCGGC ACGCTGCGGC AGATCCACGC CGCCAACCCG
CACAGCCTGA TGGTCGGCAC CGACCTGCCC GGCACCCGAG CCCGCCGGCC GTTCGAACCG
TCCGACCTGA CCCTGATCGG CGACGCGCTC GGCGCGGCGG CGCTGCCGGC CGTCCTGCAC
GACAACGCCG TCGACTTCTA CCGAATGGAC CAGACGCATG AGCACTGA
 
Protein sequence
MAQPIFDSHL HIIDPAFPLV ANHGYRPPPF TAAEYRAAVA ALPIVGGSVV SGSFQAFDVG 
YLRAALTALG PGFVGVANVP AQATDADLID LAHSGVRGVR FNLFRGGSES VAALTTFGQR
AWAVARLHIE LYLDAADLDQ LADPIGRLPR VSIDHLGLTA AHRPTLLALA EAGVRIKATG
FGRVELDVPG TLRQIHAANP HSLMVGTDLP GTRARRPFEP SDLTLIGDAL GAAALPAVLH
DNAVDFYRMD QTHEH