| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1777 |
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| Symbol | |
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| ID | 8447380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 1951014 |
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| End bp | 1952396 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 645040904 |
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| Product | putative phytochrome sensor protein |
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| Protein accession | YP_003201156 |
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| Protein GI | 258652000 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.00250628 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.11028 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTCAG CGAGCGGCCG CTCGGCGGGC TCCCGGGAGG GCGTCACCCG GCCGGCCCCC
GCCTCGTTCC TCGCGCTGCC CAAGGGGTCG AACGCGGTCA GTGAGCGCAA CCGGCTCGAA
CGGGCCTACG ACGCCTTCCT GAGCACCGGT GAGGTCGGCT CCGTCCGCCC GGTGGTGGCC
GATTCCTGGC GCCTGTCCCG GGCCAGCGGG GTCAGCCCGG ACGGGGTGCT GCCCGAGGTC
GACCTGCTGG ACCGGGAACT GGAGGCCTAC CGATCGGCGC ACCCGCTGGC GTCGGTGATG
CCGTTGCTGC GGCGGCTCCT GATCGACGAG GCCGAGGAGG CCGGCGCGAT CGTCGTCGTC
GCCGACGCCG ACGCCCGGCT GCTGTGGGTG GAGGGCGATG CCCAGCTGCG TCGTCACGCC
GAAGCCATGA ACTGGGTGGC CGGAGCTCGC TGGGACGAGC GGGTGGCCGG CACGAATGCG
CCGGCGGCGG CCATGCGACT CGATCATGCC CTGCAGGTCT TCGCCCGCGA GCACTTCGCC
AGCAACGTGG CCGGCTGGTC GTGCACGGCC GCTCCCATCC ACGACCCGCT CACCGGTGAG
GTGCTGGGTG CGCTGGACAT CACCGGACGG GACGAGGTCG CCGCTCCGGC CGTCCTCGGT
CTGGTCCGGG CGGCGGCCGC GGCGGCCGAG ACCGAACTGC GGATGTTGGC CCTGACCCGG
CCGCCCGCCA AGTCGTCCCG ACGCTCCACC GCCCGGCCGA CACTGCTGAC GGCGGCCGGA
ACGCAACGGC TGTCGGTGCT GGGTCGGGAC CGGGCCTTGC TCGGCGCGGA GAACGACCCC
GCCGGCGGAA CGGAGCTGTC CATGCGGCAC TCCGAGTTGC TCTTCCTGCT CGCCCGGCAC
CGGGCCGGGT ACAGCGCCGA CCAGCTGGCC ATCGCCCTGC ACGAGCGCGA TGTCGCCGCC
GTGACCGTGC GGGCCGAGCT GAGCCGGCTG CGTTCGTTGG TGCCCGGGCT CGGGCTCTCC
GGCCGCCCGT ACCGGCTGAC CTCGGCGCTG ACGACCGACG TCGACACGGT GCGCGCCTGC
CTGTTGCGCG GCGATGTCGC CGCCGCGGTC GAGGCCTACC CCGGTCCGGT GCTGCCGTCC
TCGGAATCAC CCGAGGTGCA GGCCGCCCGG GACGAGGTGC ACCGCGAGAT CCGTTCGGCG
GTCCTGGGTT CGGCCCATGC GCCGGCGGTG CTGCGATTCG CCAACCGGCC GTGCAGCCGC
GATGACGTGC TGATCTGGCG GCACGCCGTC CGGCTCGCGC CGCCCTCGAC CAAGCCGGTG
CTGGTCGAGC ACCTGTTGCG CATCGAGCGG GAACTGGGCG CGGCCCCGGT CCGCTCCCGC
TGA
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| Protein sequence | MASASGRSAG SREGVTRPAP ASFLALPKGS NAVSERNRLE RAYDAFLSTG EVGSVRPVVA
DSWRLSRASG VSPDGVLPEV DLLDRELEAY RSAHPLASVM PLLRRLLIDE AEEAGAIVVV
ADADARLLWV EGDAQLRRHA EAMNWVAGAR WDERVAGTNA PAAAMRLDHA LQVFAREHFA
SNVAGWSCTA APIHDPLTGE VLGALDITGR DEVAAPAVLG LVRAAAAAAE TELRMLALTR
PPAKSSRRST ARPTLLTAAG TQRLSVLGRD RALLGAENDP AGGTELSMRH SELLFLLARH
RAGYSADQLA IALHERDVAA VTVRAELSRL RSLVPGLGLS GRPYRLTSAL TTDVDTVRAC
LLRGDVAAAV EAYPGPVLPS SESPEVQAAR DEVHREIRSA VLGSAHAPAV LRFANRPCSR
DDVLIWRHAV RLAPPSTKPV LVEHLLRIER ELGAAPVRSR
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