Gene Namu_1727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1727 
Symbol 
ID8447329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1888257 
End bp1889675 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content71% 
IMG OID645040853 
Productband 7 protein 
Protein accessionYP_003201106 
Protein GI258651950 
COG category[S] Function unknown 
COG ID[COG2268] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.000752152 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0958573 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGGTGC CGAAGAACAA GGTGGCGGTG TTCACCGGTC GCGGTGAGGC CAAAATCATC 
AATGGCGGCG CCCGCTTCCG GATGCCGTTG TTGGAGCAGG TCAACATCAT GTCCATCGAG
CCGTTCAACC TCGAGGCCAA GGTGGTCGAC GTCTACTCCA AGGACAACGT GCCGGTCAGC
GTCACCGCGG TGGGCCAGGT CAAGTTCTCC TCCAGCCGGG AGGCGTTCGC GCTGTCCACC
GAGCGGTACC TGGACACTCC GCGGGACACC CTGCGGCCGC AACTCACCGA GATCGTCTCC
GGCACCATGC GCAACATCGT CTCCCAGCTG ACCGTCGAGG AGCTCAACGG CAACCGGGAG
GAGTTCATGC GGCGGGTCAA GGACGAGGCC GCGCAGTCGT TCCAGCCGAT CGGCATGCAG
CTGGACGTGT TCAACATCCA GAACATCTCC GACAACAACG GCTACCTGGA CGCCCTGGGC
CAGCGCCGGA TCGCCGAGGT CAAGCGGGAC GCGGTGATCG GCCGGGCCAA CGCCGAACGG
GACGCGGCGA TCCAGTCGGC CTCGGCCGAG CAGGAGGGCA AGGTCGCCCG CGCCCAGGCC
GACACCAAGA TCGCCGAGGC CGACCAGGCC CGGGACCTGC GGCTGGCCGC CATCGCCACC
GAAGTGGACG CGGCCAAGGC GCGGGCCAGC CAGGCCGGTC CGCTGGCCGA GGCTCAGGCG
CAGCGTGCCG TGGTGCTGGC CGGCGTGCAG ACCGACCGGG AGCGGACCGA GGCCCAGATC
GGGGTCGAGG CCCAGCGGGC GCTGCAGAAG GAGAAGGCGG TCCAGGCCGA CATCGTCATC
CCGGCCGAGG CCGAGCGTCG CGCGGCGGTC GCCCGGGCCG AGGGCCAGCG CGACGCCGAC
ATCGCGGCGG CCACCGCCGC CGCCCGCCGT CGGGAATTGC AGGGCAAGGC CGACGCCGAC
GCCCGCAGCA TCCTGGCCGG CGCGTCGCAG ACCGAGAAGG AGGCCGAGGC GGCCGGCACC
AAGGCGCTGC GGCTGGCCGA GGCCGACGGT ATCCGCGCGG TGATGAGTGC CGAGGCGGAG
GGCCAGGCCA AGCGGGCCGA GGCGCTCAAC CAGCTCTCCG ACCAGGCGGC CCGGCAGAAC
GTGCTGCCGC AGTTGATCGA GATCCTGCCG CAACTGGCCG AGGCCATCGC CAAGGGCGTG
AACATCGAGA AGATGGTGGT GGTCGACTCC GGGTCCGGCG GGGCCACCGG CTCCGGCGCG
ATCCAGCGGG CGATCGCGGT CACCCCGGCC ATGCTCAACC AGGTGTTCGA GGTGTCCAAG
GGCCTCGGGC TGGACCTGTC CGGCCTGTTC GGCAAGGCCG GCATCACCGC GGACGACGCC
GCCCCGACCG ACGGCGCGGT CGTCCGGACC GATCGATGA
 
Protein sequence
MKVPKNKVAV FTGRGEAKII NGGARFRMPL LEQVNIMSIE PFNLEAKVVD VYSKDNVPVS 
VTAVGQVKFS SSREAFALST ERYLDTPRDT LRPQLTEIVS GTMRNIVSQL TVEELNGNRE
EFMRRVKDEA AQSFQPIGMQ LDVFNIQNIS DNNGYLDALG QRRIAEVKRD AVIGRANAER
DAAIQSASAE QEGKVARAQA DTKIAEADQA RDLRLAAIAT EVDAAKARAS QAGPLAEAQA
QRAVVLAGVQ TDRERTEAQI GVEAQRALQK EKAVQADIVI PAEAERRAAV ARAEGQRDAD
IAAATAAARR RELQGKADAD ARSILAGASQ TEKEAEAAGT KALRLAEADG IRAVMSAEAE
GQAKRAEALN QLSDQAARQN VLPQLIEILP QLAEAIAKGV NIEKMVVVDS GSGGATGSGA
IQRAIAVTPA MLNQVFEVSK GLGLDLSGLF GKAGITADDA APTDGAVVRT DR