Gene Namu_1692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1692 
Symbol 
ID8447293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1859316 
End bp1859951 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content71% 
IMG OID645040817 
Productisochorismatase hydrolase 
Protein accessionYP_003201071 
Protein GI258651915 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0105025 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.075058 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCATT CACCGACGCC CGATGCCCCG ACCAGCACCC CGACCTGGAC CCACGGACCC 
GACCACGCGC TGCTGGTGGT CGACATGCAG CACGACTTCG GTCACCCGGA GGGCTCGCTG
TTCGTCCAGG GCGCCCCGGA CATCGTCGAG CCGATCAACC GGGCCATCGA ACAGGCCCTG
GCCGCCGGCC ACCTGGTGGT CTACACCCGG GACTGGCACC CGGAGGTGAC CCCGCACTTT
GCCGAGCACG GCGGGCTGTG GCCGGCGCAC TGCGTCATCG AATCGGCCGG GGCCGAGTTC
CTGCCCGGGA TCACGGTCGA CGGGCCGGTC GTGCACAAGG GCTCCGGCCC GGAGGACGGC
TACAGCGGGT TCAGCGTGCT GCACCTGCCG ACCGGGCAGA ACCGGGAGAC CGACCTGTCG
GCGATCCTGG ACGAGAACGG CGTCATGGCC GTGACGGTCG TCGGACTGGC CGGCGACTGG
TGCGTCAAGT CCACCGCCAT CGACGCGGTC CGGCTGGGCT ACCGCACCCT CGTGCCGCTG
GCCCTGACCC GGTTCGTCGA GCTCAACCCG GGTGACACCG AGGCCGCGAT CGAGGCCATG
CGGCAAGCCG GCGTGCAGGT GATCGAGGCC GACTGA
 
Protein sequence
MTHSPTPDAP TSTPTWTHGP DHALLVVDMQ HDFGHPEGSL FVQGAPDIVE PINRAIEQAL 
AAGHLVVYTR DWHPEVTPHF AEHGGLWPAH CVIESAGAEF LPGITVDGPV VHKGSGPEDG
YSGFSVLHLP TGQNRETDLS AILDENGVMA VTVVGLAGDW CVKSTAIDAV RLGYRTLVPL
ALTRFVELNP GDTEAAIEAM RQAGVQVIEA D