| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1672 |
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| Symbol | |
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| ID | 8447271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 1837081 |
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| End bp | 1838340 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 645040795 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_003201051 |
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| Protein GI | 258651895 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.576695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.34743 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGACCG CCACCGACCA CATCCAGGAC GAGGTGCGCG AGCTGATCCG GCGCCGCGGC
ATCGACCCGG TCACCGACCA CCGGGCCACC CGGCTGCTGA TCGACGAGGT GGTCGCCCAC
TACGAGGAAC GCGTCCCGGT CTCGGCGCTG CCGCCGCTGC TGGACCGCAG CGGCACCATG
CGGCACGTGT TCGACGCCCT GGCCGGGCTC GGCCCGCTGC AGAAGTTCCT CGACGACCCG
GCGATCGAGG AGATCTGGAT CAACCAGCCC GGCCGGGTGT TCATCGCCCG GCACGGCCGC
TCCGAGCTGA CCACCGTCGT GCTCTCCGCC CAGGACGTCC GCGACCTGGT CGAGCGCATG
CTCAAGCCCT CGGGCCGCCG GCTGGACCTG TCCTCGCCGT TCGTCGATGC CCTGCTTCCC
GACGGCAGCC GGCTGCACGC GGTCATCCCG GACATCACCC GCGAGCACCT GAGTCTGAAC
ATCCGCAAGT TCGTGGTCGC CGCCAACGGC CTGGAGGACC TGGTCGCGCT GGGCACCATC
ACCCCGCACG CGGCCCGGTT CCTGGAGGGC GCGGTTGCTG CCGGGCTCAA CATCATCGTC
GCCGGCGGCA CCCAGGCCGG GAAGACGACC CTGCTCAACA CCCTGATCAA CTCGATCCCG
GCCCGGGAGC GGGTGATCAC CTGTGAAGAG GTGTTCGAGC TGCGCCCCAA TCTGCCCGAC
GTGGTGGCCA TGCAGACCCG CCAGCCCAAC CTGGAGGGGC ACGGCGAGAT CCGGCTGCGC
CGGCTGGTCA AGGAGGCGCT GCGGATGCGG CCCAGCCGGC TGATCGTCGG CGAGGTCCGC
CAGGAGGAGT CCCTCGATCT GCTGATCGCG CTGAACTCGG GGCTGCCGGG GATGTGCTCG
GTGCACGCCA ACTCGGCCCG GGAGGCGGTG GTCAAGCTGT GCACGCTGCC GCTGCTGGCC
GGCGAGAACG TCACCGACGC GTTCGTCGTA CCGACCGTGG CCGCCTGCAT CGATCTGGTC
GTCCAGGTCG GGGTCGAGCC GGACGGCTCG CGCCGGATCC GGGAGATCGT CGCCCTGCCC
GGCCGGGTCG AGGGCGGCGT GGTGGAGACC GAGGACATCT TCACCACCCG CGCCGGCGCG
CTGGTCCGGG CCCAGGGTTT CCCGCCGCAC CCGGACCGGT TCGCCCGGCA CGACATCGAC
CTGGTCGCGC TGCTGGCCGG CGACCCGCCG GCCCGCGCAG CCGCGCGATC GGTCAATTGA
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| Protein sequence | MLTATDHIQD EVRELIRRRG IDPVTDHRAT RLLIDEVVAH YEERVPVSAL PPLLDRSGTM
RHVFDALAGL GPLQKFLDDP AIEEIWINQP GRVFIARHGR SELTTVVLSA QDVRDLVERM
LKPSGRRLDL SSPFVDALLP DGSRLHAVIP DITREHLSLN IRKFVVAANG LEDLVALGTI
TPHAARFLEG AVAAGLNIIV AGGTQAGKTT LLNTLINSIP ARERVITCEE VFELRPNLPD
VVAMQTRQPN LEGHGEIRLR RLVKEALRMR PSRLIVGEVR QEESLDLLIA LNSGLPGMCS
VHANSAREAV VKLCTLPLLA GENVTDAFVV PTVAACIDLV VQVGVEPDGS RRIREIVALP
GRVEGGVVET EDIFTTRAGA LVRAQGFPPH PDRFARHDID LVALLAGDPP ARAAARSVN
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