| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1650 |
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| Symbol | |
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| ID | 8447249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 1816399 |
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| End bp | 1817253 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 645040773 |
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| Product | type II secretion system protein |
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| Protein accession | YP_003201029 |
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| Protein GI | 258651873 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.0624732 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00100829 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGGGGCGT TTCTCGGTTT GATGCTGGGC GTCGGCCTGT TGCTGATCTG GCACGGCCTG
TCCGCGACCG AATCGACCCG ACCGCGAAAG GTGCCGTTCG AACGCACCCG CGAGCACCTG
CTTCAGGCCG GCCTGCCGGG CATCTCCCCG GTTCAGCTAT TCGGGCTGCA GGCGCTGTCG
GCGGTGCTCG TCGGCCTGCT GGGACTGACC CTGACCCAGT CGGTCAGCGT CTCGTTGATC
TTCGCGATCT TCGCGGCCGC GGTGCCCGCG CTGATGGTGT CCCGGCTGCG GCACAAACGG
CAGGCGGATC TGCGCGAGCT CTGGCCGGAG GTGGTCGACA ACCTGACCTC CGGGGTGCGC
GCCGGCCTGT CCCTGCCGGA GGCGCTGGCC GCGATCGGCG ACCGCGGGCC CGAGCAGCTT
CGCGACCCGT TCAAGCAGTT CGGCGCCGAC TACCGGACGA CCGGACGGTT CAACGATTCC
CTGGACCGGC TCAAGGCGAC CCTGGCCGAC CCGGTCGGTG ACCGGGTGAT CGAGTCCCTG
CGGGTGGCCC GGGAGGTCGG CGGCACCGAT CTGGGCCGGC TGCTGTCCAC CCTGTCCGGA
TTCCTGCGCG ATGACGCCCG TACCCGCGCG GAGCTGCTGG CCCGTCAGTC CTGGTCGGTG
AACGCGGCGC GGATGGCCGT GGCGGCGCCG TGGCTGGTGC TGATCCTGCT GGCCACCCAA
CGCGAGACGC TGCAGGCCTA CGACACCCCC ACCGGCACGG TGATCCTGAT CGCCGGGGCC
GTCCTGTCCT TCATCGCCTA CCGGCTGATG ATCAGGATCG GCCGGCTGCC CGAGGATCGG
CGGGTGCTGC GATGA
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| Protein sequence | MGAFLGLMLG VGLLLIWHGL SATESTRPRK VPFERTREHL LQAGLPGISP VQLFGLQALS
AVLVGLLGLT LTQSVSVSLI FAIFAAAVPA LMVSRLRHKR QADLRELWPE VVDNLTSGVR
AGLSLPEALA AIGDRGPEQL RDPFKQFGAD YRTTGRFNDS LDRLKATLAD PVGDRVIESL
RVAREVGGTD LGRLLSTLSG FLRDDARTRA ELLARQSWSV NAARMAVAAP WLVLILLATQ
RETLQAYDTP TGTVILIAGA VLSFIAYRLM IRIGRLPEDR RVLR
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