| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1597 |
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| Symbol | |
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| ID | 8447195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 1759716 |
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| End bp | 1760777 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 645040724 |
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| Product | PDZ/DHR/GLGF domain protein |
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| Protein accession | YP_003200981 |
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| Protein GI | 258651825 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3480] Predicted secreted protein containing a PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.376622 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.235489 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTGGT TCACCCGGCT GTCGACCCGC GGCCGCACCC TCGTCGTGGG CGGCGCGACC
AGCGCGGTCC TGTTGACCGC GGCGGTGGCC ATTCCCATCC CGTACGTCGC CATCTCGCCG
GGGGTGACCT ACAACGTGCT CGGCTCGGTC GGCGACACCC AGGTGATCAC TTTCACCGGT
GACGACGTAC CGGCCGGGGC GGACGCCGCC CGCTCCGGCG AGGGCAACCT GAACATGACC
ACCATCTCGA TCAGCGACGG CATCACCCTG TTCGAGAGCC TGGGGCTGTG GGCGTCGGGC
CGGTTCGCGC TGGCCCCTCG CGAGGACTAC TTCCCGCCGG ACCAGACGGT CGAGCAGGTG
GAGGCGCAGA ACGCGCAGGC ATTCCGGGAC TCGCAGTCGG CGGCCGAGAT CGCGGCCCTG
CGCTATCTGG ACTACCCGAA CGTGGTCTAC GTCGGCGACA TCGCCGAGGG CTCACCCAGT
TCCGGGGTGC TGCAGCCGCA GGACAAGATC GTCGGGCTGG ACGGCACGCC GATCACCGAC
TTCGCCTCCC TGCAGGCCGC GCTGGCCGGG ACCACCCCGG GTCAGACGGT GACGGTCACC
GTGCACCGGG ACGGGCAGAG CGTCGACGAG AAGGTCACCC TGGGCAGCAA CCCGAGCGTG
GGCACCCAGG GTGTGCTGGG GATCGGCGCC GTGCAGCGGC CGCAGGCGCC CTTCGACATC
ACGATCGCGC TGGAACGCAT CGGCGGCCCG TCGGCCGGGT TGATGTTCGC GCTGGGCATC
ATCGACCGGC TCTCCGACGA GGACCTGACC GGGGGCGAGT TCGTCGCCGG CACCGGCACC
ATCGACGCGG ACGGCAAGGT CGGCCCGATC GGCGGCATCC TGTTCAAGAT GATCGCCGCT
CGGGAGGCCG GCGCCACCGT GTTCCTGGTG CCCGCGGACA ACTGCGCGGA GGCGTTGACC
CAGGTGCCGG AGGGTCTGCA GCTGGTCAAG GTCGGGACGC TCACCGACGC CACCGCGGCG
CTGGACACGC TGCGGGCGGG CGGCACCCCG CCCGGCTGCT AG
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| Protein sequence | MSWFTRLSTR GRTLVVGGAT SAVLLTAAVA IPIPYVAISP GVTYNVLGSV GDTQVITFTG
DDVPAGADAA RSGEGNLNMT TISISDGITL FESLGLWASG RFALAPREDY FPPDQTVEQV
EAQNAQAFRD SQSAAEIAAL RYLDYPNVVY VGDIAEGSPS SGVLQPQDKI VGLDGTPITD
FASLQAALAG TTPGQTVTVT VHRDGQSVDE KVTLGSNPSV GTQGVLGIGA VQRPQAPFDI
TIALERIGGP SAGLMFALGI IDRLSDEDLT GGEFVAGTGT IDADGKVGPI GGILFKMIAA
REAGATVFLV PADNCAEALT QVPEGLQLVK VGTLTDATAA LDTLRAGGTP PGC
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