Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_1575 |
Symbol | |
ID | 8447173 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 1736444 |
End bp | 1736800 |
Gene Length | 357 bp |
Protein Length | 118 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 645040702 |
Product | histidine triad (HIT) protein |
Protein accession | YP_003200959 |
Protein GI | 258651803 |
COG category | [F] Nucleotide transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.094331 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00229819 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCCCTACA CCAGTGACGA CTGCCTGTTC TGCAAGATCG TCGCCGGCAC CATCCCGGCC GACGTGGTGC ACCGGGACGA CCACGTGGTC GCCTTCCGGG ACATCAACCC GCAGGCGCCC ACGCACATCC TGATCATCCC GACCACCCAT TACGAGAACG CCGCCGAGGT CGCCGGCGAC GACCCCAGCG GCCTGGCCGC CCTGGTGGTC ACGGCCCGGG TGCTGGCCCA GGCCGAGGGG ATCGACCGGT CCGGGTACCG GATCGTCACC AACACCGGCG CCGACGCCGG GCAGAGCGTG TTCCACACCC ACCTGCATCT GCTCGGTGGG CGGCGGATGG CCTGGCCGCC CGGCTGA
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Protein sequence | MPYTSDDCLF CKIVAGTIPA DVVHRDDHVV AFRDINPQAP THILIIPTTH YENAAEVAGD DPSGLAALVV TARVLAQAEG IDRSGYRIVT NTGADAGQSV FHTHLHLLGG RRMAWPPG
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