Gene Namu_1564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1564 
Symbol 
ID8447162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1725363 
End bp1726568 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content76% 
IMG OID645040691 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003200948 
Protein GI258651792 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.194805 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.215005 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCACCC GCTCCGTCAC CGGCCTGATC GGGGTGCTGG CGGCCACCGC CCTGTCGGTC 
ACCGCGAACA GCGTGGTGGC CATCGCCGTG CCCTGGCTGG TGCTCGAACG CACCGGCAGC
GCCGCCCTGG CCGGCCTGGC CGGGGCCGCC GCCATCGCCC CGATCGTGTT CTCCGCGGTG
TTCGGCGGGG CCCTGATCGA CCGGATCGGC AAGCGCCGGA CCTGCCTGAT CGCCGACACC
CTGAGCGCCG CGGCGGTGGC CGCGTTGCCG CTGGCCGACG CGACCGTCGG GTTGACCACC
GGGCTGGTGC TGGTCCTGGT CGCGGTGGGC GCCGTGTTCG ACAGCCCGGG CGCGGCCGCC
CGGGAGGCCC TGCGGCCGGA CGTGGCCCGG GCCGCCCAGG TGCCGCTGGC CCGGGTGAAC
GCCTGGGGCG AGGTGGCCGA GAACACCGGC TACCTGGCCG GTCCCGCGCT GGCCGGGTTG
CTGCTGGTGG TCGTCGGCGG GTTCGGCACC GTCTGGGTGG CCGCCGCCCT GTTCGGGCTG
TCCCTGCTGG TCACCTGGTT CCTGGTGCCG GCGCACCTGT CGGTGCGGCC GTCGCCCGAG
CCGTACCTGC GCTCGGTGTG GGACGGGATC CGTCTCCTGC TGCGCGATTC CACGCTCCGC
GCGGTGACCC TAACCGCGGC GGTGATCTGG CTGTTCCTGC TGCCCTTCGA GTCGGTCGTG
CTCAACGCGT ACCTGAACGA GTCCGGCCAG GTGGTGGCGT TCGGGGTGAT CCTGGCCGCC
TACGCCGGCG GCGCGATCGG CGGGGCCCTG GCCTACGGGG CCATCGCCCA CCGGGTCCCC
ACCCGGGTCG CGCTGATCGT CGCGCTCGCC CTGGCCGGCC TGTCGCTCGG TGCGTTCGCG
GTCCTGCCGC CGGTGCCGGT GATGGTGGCG CTGGCGCTGG CCGCCGGGGT GGTGACCGGA
CCGATCAACC CGTTGTGCGC GCTGATCGTG CAGTCGCGGA CCCCGGCACG CTTCCGCGGC
CGGGTCATCG GCTCCTACAC CGCCCTGGCC CTGGCCGCCG GCCCGCTCGG CCTGCTCGCG
TTCGGCCCGC TGGTCGACAC CTACGGTCCG GCCGCCGGTT TCGCCGCCAT CGGCGGTGGC
CTGCTGCTGG CCGCCCTGCT CGCCGCCGGG GCGCCCGGGC TGCGCCGGCT GGCCGGCTCA
GCGTAA
 
Protein sequence
MRTRSVTGLI GVLAATALSV TANSVVAIAV PWLVLERTGS AALAGLAGAA AIAPIVFSAV 
FGGALIDRIG KRRTCLIADT LSAAAVAALP LADATVGLTT GLVLVLVAVG AVFDSPGAAA
REALRPDVAR AAQVPLARVN AWGEVAENTG YLAGPALAGL LLVVVGGFGT VWVAAALFGL
SLLVTWFLVP AHLSVRPSPE PYLRSVWDGI RLLLRDSTLR AVTLTAAVIW LFLLPFESVV
LNAYLNESGQ VVAFGVILAA YAGGAIGGAL AYGAIAHRVP TRVALIVALA LAGLSLGAFA
VLPPVPVMVA LALAAGVVTG PINPLCALIV QSRTPARFRG RVIGSYTALA LAAGPLGLLA
FGPLVDTYGP AAGFAAIGGG LLLAALLAAG APGLRRLAGS A