| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1388 |
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| Symbol | |
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| ID | 8446984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 1534724 |
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| End bp | 1536355 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 645040519 |
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| Product | transcriptional regulator, PucR family |
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| Protein accession | YP_003200778 |
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| Protein GI | 258651622 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG2508] Regulator of polyketide synthase expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00311345 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCACGA TGAGGCTGAC CGACCTGCTC GCCGCGCCGG AGCTGGGCAT TCGCGCGCTG
CACGGCGACG CGCAGGATCT GGCCCGCCCG CTGGGCTGGA TCTACACCAC CGACCTGCCC
GACCCCAGCC GCTACCTCAC CCCCGGCCAG ACCCTGATGA CCGGAATGAT GTGGCGCACC
GGTCCGGGGG ACAGCGATCC GTTCGTCCGG CGGCTGGTGG AATCCGGGGC AGCCGCGCTC
ATCGTCGGTG AGGCACTGTT CGATTTCGTC CCCGAGGACG TGGTCGCCGC CTGCCGCCGG
TGGAGCCTGC CACTGCTGGC GGTGCCGGCC TCCGTCTCCT TCGCCCAGGT CACCGAGTTC
GTGGCCGGGC AGCAGGCGCA GCGGCGGCTG GGCCGGCTGA CCGACGGGTT GATCCGGCAA
CGGCAACTGC TGGCCGAGAT GGCCGCCGGG CAGACCCTGG ACGAGCTGGT CCGGCGGATC
GCCCGGGAGA CCGGCCTGAG CTGCCGGGTG CTGACCTCGA CCGGCCGGCA GATCGCCTCG
TCCACCGCGC CGTTGGCCGA GCCGGACGTG GATCTGCTGG TCGGGCAGGC GCTGGCCGCG
CAACGGTTCC CGACCCGGGT CAGCACCGCA ACCGGTTCGG GCACCGCCTT CCTGGTCGGC
CCGGCGTCCC AGCACCGGGC GCTGGCCTGG TTCGTGATCG CCGACCTGCC CGGCAACCGG
CCGGCCGACC GGCCCGAGCC CGGGGAGGAC CCGGACACCG TCGATCCGTT CAACGAGCTG
GCCGCGATCG CGGCCCTGGA ACGACGGCGG ACCGAAGAGC CCATCCGGGC GCGCCGGGAA
CTCACCGATC AGGTCATCAC CCTGCTGGAC GAGGACGCCG AGCGCCCGGA GATCCCGATC
CTGCTGCGCC AACTGGGCCT GGACCTGACC CGGCCGACCG TGGCCGTGGT GGCCCAGGCG
ATCGGCTCGA CCACGCCGCT GGGCCTGGTC GGCAGCCTGC TCGGGGAGGC GGTCAGTCAT
CTGTCCACTC CGGTGGTCGG GTCCGATGCG CAGGGCCTGG CGGTCGCGCT GGTGTCCATG
CCGGGGGCCG GGCCGGACAG CGACCAGGAG AACCCGGCCG GGACCGCCGG ATCGATCGCC
GCCGACACCG TCCGCCGGGC CCTGCTCCGG CTCGGACCGG CGCTGCCCGG GATCCGGCTG
GACGTCGGCG TCAGCCGGCC CACCGAACCG GCCGGGCTGG CCGGGGCCCT ACGAGCCGCC
CGCTACGCCC GGTTGCTGGC CTCCGGCCGG CCCGGTGATC CGGCCGACCG AGGCGTCCGG
GTGGCCTCGG GCGACCGGGC CACCTCGGCG ATCATGTTGC TGTCCGCGGT GCCGGACCGG
CTGCGCCGGT CGTTCGCGAC CGCCGTCCTG CAGGACGTCG TCGAGTACGA CCGGCGCACC
GGCGCGGACC TGGTGGTCAC GCTGCGCGCG TTCCTGGACG CCAACGGCTC GTGGAGCCGG
ACCGCGCAGC GCCTGCATCT GCACCTGAAC ACCGTGCGGT ACCGGATCGC CCGGGTCGAG
GAGCTGACCG GACGGGACCT GAGCCGCATG GACGACCGGG CCGATGTCTA CCTGGCGTTA
CACCTGCTCT GA
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| Protein sequence | MITMRLTDLL AAPELGIRAL HGDAQDLARP LGWIYTTDLP DPSRYLTPGQ TLMTGMMWRT
GPGDSDPFVR RLVESGAAAL IVGEALFDFV PEDVVAACRR WSLPLLAVPA SVSFAQVTEF
VAGQQAQRRL GRLTDGLIRQ RQLLAEMAAG QTLDELVRRI ARETGLSCRV LTSTGRQIAS
STAPLAEPDV DLLVGQALAA QRFPTRVSTA TGSGTAFLVG PASQHRALAW FVIADLPGNR
PADRPEPGED PDTVDPFNEL AAIAALERRR TEEPIRARRE LTDQVITLLD EDAERPEIPI
LLRQLGLDLT RPTVAVVAQA IGSTTPLGLV GSLLGEAVSH LSTPVVGSDA QGLAVALVSM
PGAGPDSDQE NPAGTAGSIA ADTVRRALLR LGPALPGIRL DVGVSRPTEP AGLAGALRAA
RYARLLASGR PGDPADRGVR VASGDRATSA IMLLSAVPDR LRRSFATAVL QDVVEYDRRT
GADLVVTLRA FLDANGSWSR TAQRLHLHLN TVRYRIARVE ELTGRDLSRM DDRADVYLAL
HLL
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