Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_1298 |
Symbol | |
ID | 8446894 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 1423726 |
End bp | 1424454 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 645040431 |
Product | GntR domain protein |
Protein accession | YP_003200690 |
Protein GI | 258651534 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.0878835 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.515032 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTCGT CCGACAGCTG GACAACCTCG GCACCCAAGT ACGCCCGGGT CTCCGCCGCC GAGGCGGTGC TGGCCGATCT ACGGGGCGCC ATCGAGCGGG GCGAGCTACC GGTGGGCGAT CGGTTGCCCT CGGAGGCCGC GCTGGCCACC CGGTACGGGG TCAGCCGCAC GGTGGTCCGG GAGGCGCTGC GCTCGTGCGA GACCCTGGGC CTGACCCGGA CCCGGACCGG CAGCGGGACC TTCGTCATCG CCGACCACGT CCCGGCCACC CTGACCGTGG GCAACTACTC CAGCCAGGAT CTGTTCGAGG CCCGGCCGCA CGTCGAGATC CCGGTGGCCG GCCTGGCCGC CGCCCGCCGC TCCCCCGAGC AGCTCGCCGA GCTGCACGGG ATGCTGGATC GGATGCTGGC CACCACCGAA CCGGCCCGCT GGGTCGAGCT GGACGCCTCG TTCCACGCGG CCATCGCCCG GGCCAGTGGC AACCGGGTCT TCATCGACCT GCAGGCCACC ATGGGCACCG CCGCCGCCCG CCAGTCCGAG ACGCTCAACC TGATCGCGCA TCGGCGTGAT GCGGCCAACC GCGAGCACGC CGCGATCGTC GCGGCCATCG ACGCGGGATC GCCCGAGCGC GCCCAGGAGG CGATGACCGC GCACCTGGTG CAGGTGCGCC GGGCGGTGGA GGACCTGCTG ATCGGTGCGC CGGGCGCCCC CGACGCACCG GCCCCCTGA
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Protein sequence | MSSSDSWTTS APKYARVSAA EAVLADLRGA IERGELPVGD RLPSEAALAT RYGVSRTVVR EALRSCETLG LTRTRTGSGT FVIADHVPAT LTVGNYSSQD LFEARPHVEI PVAGLAAARR SPEQLAELHG MLDRMLATTE PARWVELDAS FHAAIARASG NRVFIDLQAT MGTAAARQSE TLNLIAHRRD AANREHAAIV AAIDAGSPER AQEAMTAHLV QVRRAVEDLL IGAPGAPDAP AP
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