Gene Namu_1298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1298 
Symbol 
ID8446894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1423726 
End bp1424454 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content74% 
IMG OID645040431 
ProductGntR domain protein 
Protein accessionYP_003200690 
Protein GI258651534 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.0878835 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.515032 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCGT CCGACAGCTG GACAACCTCG GCACCCAAGT ACGCCCGGGT CTCCGCCGCC 
GAGGCGGTGC TGGCCGATCT ACGGGGCGCC ATCGAGCGGG GCGAGCTACC GGTGGGCGAT
CGGTTGCCCT CGGAGGCCGC GCTGGCCACC CGGTACGGGG TCAGCCGCAC GGTGGTCCGG
GAGGCGCTGC GCTCGTGCGA GACCCTGGGC CTGACCCGGA CCCGGACCGG CAGCGGGACC
TTCGTCATCG CCGACCACGT CCCGGCCACC CTGACCGTGG GCAACTACTC CAGCCAGGAT
CTGTTCGAGG CCCGGCCGCA CGTCGAGATC CCGGTGGCCG GCCTGGCCGC CGCCCGCCGC
TCCCCCGAGC AGCTCGCCGA GCTGCACGGG ATGCTGGATC GGATGCTGGC CACCACCGAA
CCGGCCCGCT GGGTCGAGCT GGACGCCTCG TTCCACGCGG CCATCGCCCG GGCCAGTGGC
AACCGGGTCT TCATCGACCT GCAGGCCACC ATGGGCACCG CCGCCGCCCG CCAGTCCGAG
ACGCTCAACC TGATCGCGCA TCGGCGTGAT GCGGCCAACC GCGAGCACGC CGCGATCGTC
GCGGCCATCG ACGCGGGATC GCCCGAGCGC GCCCAGGAGG CGATGACCGC GCACCTGGTG
CAGGTGCGCC GGGCGGTGGA GGACCTGCTG ATCGGTGCGC CGGGCGCCCC CGACGCACCG
GCCCCCTGA
 
Protein sequence
MSSSDSWTTS APKYARVSAA EAVLADLRGA IERGELPVGD RLPSEAALAT RYGVSRTVVR 
EALRSCETLG LTRTRTGSGT FVIADHVPAT LTVGNYSSQD LFEARPHVEI PVAGLAAARR
SPEQLAELHG MLDRMLATTE PARWVELDAS FHAAIARASG NRVFIDLQAT MGTAAARQSE
TLNLIAHRRD AANREHAAIV AAIDAGSPER AQEAMTAHLV QVRRAVEDLL IGAPGAPDAP
AP