Gene Namu_1289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1289 
Symbol 
ID8446885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1415645 
End bp1416538 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content74% 
IMG OID645040422 
Productamidohydrolase 2 
Protein accessionYP_003200681 
Protein GI258651525 
COG category[R] General function prediction only 
COG ID[COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0237628 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.372585 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCTC CCCGCACCAT CGACATTCAT CAACACCTGT GGCCGGTCGA CCTGATCGAG 
GCGTTGCGCC GGTGCAGCGT CCCACCCCGG CTCGACGGCT GGACGCTGTA CCTGCCCGGT
GAACCCGCGT ATCAGGTCGA CCCGGCCGAC CACGATCCGC AAAGCCGTCG GGCCACCGAG
TCCGGCCGGA TCGTGCTCGG CCTGTCCAGC CCGCTGGGCA TCGAGGACCT GCCGCCGGAG
CAGGCCGCAC CCCTGTTGGC CGCCTGGCAC GACGGGGTCG CCCGGTTGCG GCCCGACTTC
GACGCCTGGG CCTCGGTCGC CGGTCGCGAC CCGGATCTGA CCGCGCTGCG GCAGCAGCTG
GCCCAGGGCT TCGTCGGCCT GCAGATCCCG GCGACCGCGC TGGCCGGCCC GGCCGACGTC
GAGCGGCTCG GCGAGGTGCT GGCGCTGGTT CAGGCGGCCG ACCGTCCGGT GTTCGTCCAC
CCCGGACCGG TGCCCGCGGC CGGCGCCGAC CGGCCGGCCT GGTGGGCCGC CGTCGTCGAC
TACCCGACCC AGTTGCAGGC CGCCTGGTGG GCCTGGTTCG CCGCCGGCCG GTCCCAGTTC
CCTTCCCTGC GCGTGTGTTT CGCGGCCGGC GCGGGTCTCG CTCCGGTCCA CCACGAGCGA
TTCCAGGCCC GCGCCGGCCG CACCGTCACG GTGGACCCGC ACACCTTCGT GGAGACGTCC
TCGTACTCGC GGCAGGGCGT GGACGCCCTC ACCCGCGCCG TCGGCGTCGA CCCGATCGTG
GTGGGCAGCG ACCGCCCCTA CGGCACACCG CATCGCACCG ACCTGGGCGA GGCCGCCCGG
ACCGCCTTCA CGCAGACCAA TCCGTACCGA CTTTTGACCG GAGAACGACC ATGA
 
Protein sequence
MTAPRTIDIH QHLWPVDLIE ALRRCSVPPR LDGWTLYLPG EPAYQVDPAD HDPQSRRATE 
SGRIVLGLSS PLGIEDLPPE QAAPLLAAWH DGVARLRPDF DAWASVAGRD PDLTALRQQL
AQGFVGLQIP ATALAGPADV ERLGEVLALV QAADRPVFVH PGPVPAAGAD RPAWWAAVVD
YPTQLQAAWW AWFAAGRSQF PSLRVCFAAG AGLAPVHHER FQARAGRTVT VDPHTFVETS
SYSRQGVDAL TRAVGVDPIV VGSDRPYGTP HRTDLGEAAR TAFTQTNPYR LLTGERP