Gene Namu_1273 details

Gene Information

• Locus tag: Namu_1273
• ID: 8446869
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nakamurella multipartita DSM 44233
• Kingdom: Bacteria
• Replicon accession: NC_013235
• Strand: +
• Start bp: 1397990
• End bp: 1398610
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 645040407
• Product: pentapeptide repeat protein
• Protein accession: YP_003200666
• Protein GI: 258651510
• COG category: [S] Function unknown
• COG ID: [COG1357] Uncharacterized low-complexity proteins

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.0243714
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 19
• Fosmid unclonability p-value: 0.749972
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCCCTGC AACTGACCGA GACCGAGTAC GTGGACGAGG ATTTCGCCGA CGTCGACCTG 
ACCGGCCAGG AGCTGGCGGA CATCACCTTC ACCGGGTGCG ACTTCACCGA GGCCGCCCTG 
GTGGGGGTGC ACACCCGCCG GGTGACGTTC ACCAACTGCC GGTTTCGGGG GACCGAGCTG 
TACGACAGCA CCCACCGGTC CACCTCGTTC GCCTCGTGCA CGTTCGAACG GGCCGCGCTG 
CACGGGATGT CGCTGCACGG CTGCCGGCTG ACCGGGTCCA GCTTCACCGA CTGCCGGACC 
CGGCCGCTGA CCATCCGGGA CTGCGATCTG ACCCTGGTCT CGCTGGCCGG GGCGAACCTG 
GCCGGGGTCG ATCTGTCCGG CTTGCGGCTG CGCGAGGCCA ATCTGGTGCG GGCCGACCTG 
TCCGGGTGCG ACCTGCGCGG GGCCGACCTG ACCGGCGCGC GGGCCGAGCG GCTCAACCTG 
ACCGGCGCCG ATCTGCGCGG CGCCCGGGTC GACGCCGGGC TGTGGGTGGC GGCCGTGCTG 
ACCGGCGCCC GGGTGGACAT CGACCAGGCC GTGCTGTTCG CCGCCGCGCA CGGCCTGGCC 
ATCGGCTCGG CCGAGGACTG A 

 

Protein sequence

MALQLTETEY VDEDFADVDL TGQELADITF TGCDFTEAAL VGVHTRRVTF TNCRFRGTEL 
YDSTHRSTSF ASCTFERAAL HGMSLHGCRL TGSSFTDCRT RPLTIRDCDL TLVSLAGANL 
AGVDLSGLRL REANLVRADL SGCDLRGADL TGARAERLNL TGADLRGARV DAGLWVAAVL 
TGARVDIDQA VLFAAAHGLA IGSAED