| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1238 |
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| Symbol | |
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| ID | 8446834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 1359930 |
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| End bp | 1361783 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 645040373 |
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| Product | integrase family protein |
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| Protein accession | YP_003200632 |
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| Protein GI | 258651476 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.375916 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGGA CCGCCGAATC GACCGCGGCC CGGGCCGAGG AACCCGGGAT CGGCCAGGCT
CGGGCGGCCT ACCTGGCCGA CGCTGGCACC CAGCCGGCAC GACTGTCCCG GTCGCGGAGC
ATCGGGCGGT TCGTCACCGA GTTCGGTGAC GTGAGCGGTT GGCGGGCCTG CTCGGTGCCC
GAACGGCTCG CCGCCGGAGA CCAGGCGCGA GCCTTCGCGC ACTTCGCTGT CGTGCACGAC
CGGGTCCCGG TCGAGGCCGA GTACGTCGCA GCCGTGACGT CGAGGTGGGG CCATCACGTC
GCGAACCGAG ATCCGGAGCA GGCTAACCAA TTCCGGCGCC AGGCCGCGTC GTTGAGTTTC
AATCGGTTGG AGATCGACAA GATGTGGTCC AAGCTCGCCC AGATCTGCGT CATCACCGGC
AGCCGCCCGG ACGAACTGAG CAGCGACAAC TACGTGGCCG GGCGGGCCGC GTTCTGGGCC
GCGGTCGTCG CCAAACACGG CGGCACGATC CCGACAACAC TGGCGACCCC CCTGTTCGGC
CTGGACGCCG TGATGTTCCA CCGGGGCCAA GCGCCCCGAC CCACGACACG CAAGTCATGG
GCTGCCCGGT CGGTGCCGGA GACCAGCTGG GACCAGATCA CCGCCGCCGC CCCGATGATG
GCCGCCACCA TGCACCGCTA CCTGGACCAG CTGCGGGTCA GCCTGCGCGC TTCATCGGTC
GCCAGCATCG AGATCACCCT GCGGCAGATC GCCGGGCACC TGATCTCCAC CAGCAGCGTC
ACGACGGTCG CCGACATCGG CCGGCCGCAG ATCGAGGCCT ACGGGACCTG GCTGGCCGGG
CGTGGCGGCT ACCGCAAGAA CAGCACAATC AGCAAAACGA CCATCGGGAT GCGGATGTGT
CACCTCGGCG CGTTCTTCCG CCGGATCATC GAATGGGGCT ACCCCGACGC ACCCCTTCGG
CCACCGGTCT TCTCCTCCGA CCGGCCGGCC AAAGACAAGC CGCTGCCCCG GTTCCTCGAC
GACGCTGCTA CCGCCAAGTT CATGGCCGCG GCACGGGAGC TGCCCGACCC GTTCGGTCGG
CTCGCCATCG AGATCTTGGC CCGCACCGGC ATGCGCAAGG GTGAGCTACT CGGTCTGACC
ACCGACGCCG TTGTGCAGAT CGGCTCCGCC TACTGGCTGC GGATCCCTGT CGGCAAACTC
CACAACGACC GCTACGTTCC TCTCCACCCG CAACTGAAAA CCATGATCGA CAACTGGCTC
GAACAGCGAC CCGACTGGCA AAACAGCCAC CTGCTGTTTA CCGACCGGGG CCGGCCGATC
CCACCCACCC GAGTCGACCA CGCCGTTCAA ACAGCCGCCA CCGCAGCCGG TATCGGTCAC
GTGCACCCAC ACCAACTCCG GCACACGCTA GCCACCCAGG CAATCAACCG CGGCATGAGC
CTCGAAGCGA TCGCCGCGCT GCTGGGCCAC AAGACGATGA GCATGACCCT GGTCTACGCG
CGCATCGCCG ACCGCACCGT CGCCGACCAG TACTTCACCG TCACCGAGAA GGTCCAAGCT
CTCTACCAAC AGCAGCAACC CGCAATGCTA CCCGCCGCGG ACGAACCAGC CCCGATGCGC
AAACTCCGCG CCGAACACAG CAAACGCATG CTCGGCAACG GCTTCTGCAC CCGACCCGCC
GAACTCGAAT GCCACTACGA AACGATCTGC GAGTCCTGCA CCTTCTTCGT CACCACCATC
GAATTCCGAC CCACCCTGCA GGCTCAACGT GACGACGCCG CCCGCAAGGG TCAAAGCGGC
CGTCAGAAGG TCTACGACGG ACTCCTTCAG CGACTCGCCG ACACCGCTAC TTGA
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| Protein sequence | MSGTAESTAA RAEEPGIGQA RAAYLADAGT QPARLSRSRS IGRFVTEFGD VSGWRACSVP
ERLAAGDQAR AFAHFAVVHD RVPVEAEYVA AVTSRWGHHV ANRDPEQANQ FRRQAASLSF
NRLEIDKMWS KLAQICVITG SRPDELSSDN YVAGRAAFWA AVVAKHGGTI PTTLATPLFG
LDAVMFHRGQ APRPTTRKSW AARSVPETSW DQITAAAPMM AATMHRYLDQ LRVSLRASSV
ASIEITLRQI AGHLISTSSV TTVADIGRPQ IEAYGTWLAG RGGYRKNSTI SKTTIGMRMC
HLGAFFRRII EWGYPDAPLR PPVFSSDRPA KDKPLPRFLD DAATAKFMAA ARELPDPFGR
LAIEILARTG MRKGELLGLT TDAVVQIGSA YWLRIPVGKL HNDRYVPLHP QLKTMIDNWL
EQRPDWQNSH LLFTDRGRPI PPTRVDHAVQ TAATAAGIGH VHPHQLRHTL ATQAINRGMS
LEAIAALLGH KTMSMTLVYA RIADRTVADQ YFTVTEKVQA LYQQQQPAML PAADEPAPMR
KLRAEHSKRM LGNGFCTRPA ELECHYETIC ESCTFFVTTI EFRPTLQAQR DDAARKGQSG
RQKVYDGLLQ RLADTAT
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