| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1171 |
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| Symbol | rpsD |
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| ID | 8446767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 1287278 |
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| End bp | 1287883 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 645040308 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_003200567 |
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| Protein GI | 258651411 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTAGAT ACACCGGACC TATCACCAAG AAGTCACGCC GCCTCAAGAC CGACCTCGTC
GGTGGCGACA TGGCCTTCGA GCGTCGCCCC TTCCCGCCCG GTCAGCACGG CCGCGCGCGG
ACCAAGGAGA AGGAATACCT GACCCAGCTG CAGGAGAAGC AGAAGGCTCG CTTCACCTAC
GGCGTCATGG AAAAGCAGTT CCGTCGTTAC TACGCGGAAG CCGCCAGCCG GACCGGCAAG
ACCGGTGACA CGCTGCTGCA GATCCTCGAG TCGCGGCTGG ACAACGTCGT GTACCGGGCC
GGCCTGGCCC GCACCCGGCG GCATGCCCGG CAGCTGGTCT CGCACGGCCA CTTCGAGGTC
AACGGGGTGC GGGTGGACGT GCCGTCCTAC CGCGTCGAGC AGTACGACCT GATCACCGTG
CGCAAGCAGT CGACCGAGTC GTTCCCGTTC GAGCTGGCTC GCGCCACGTT CGGCGAGCGG
ACGCCTCCGG CGTGGATGAA GGTCGTGCCG GAAACCCTGC AGATCATCAT CCACTCGCTC
CCGGTGCGGG CGCAGATCGA CTCGCAGATC ACCGAGCAGC TGATCGTCGA GTTCTACTCG
AAGTAA
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| Protein sequence | MARYTGPITK KSRRLKTDLV GGDMAFERRP FPPGQHGRAR TKEKEYLTQL QEKQKARFTY
GVMEKQFRRY YAEAASRTGK TGDTLLQILE SRLDNVVYRA GLARTRRHAR QLVSHGHFEV
NGVRVDVPSY RVEQYDLITV RKQSTESFPF ELARATFGER TPPAWMKVVP ETLQIIIHSL
PVRAQIDSQI TEQLIVEFYS K
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