| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1108 |
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| Symbol | |
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| ID | 8446704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 1233313 |
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| End bp | 1238916 |
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| Gene Length | 5604 bp |
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| Protein Length | 1867 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 645040245 |
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| Product | putative superfamily I DNA and RNA helicase protein |
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| Protein accession | YP_003200504 |
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| Protein GI | 258651348 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0948182 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGACG GACCGACGCC GACGCTGAGC TCGGCGCAGG CGGACAAGCT CGGCCGTCAG
CTCGACGCCT GGCGCCGCCA GCTGGTGGCC CTGGACCGCC GGCAGCGGCA GCTCTACTTC
AAGCACACCC GCACCGCATC GTTGGAGCTT GTCGATCCGG GTCCGGACGA CCTGGCCATC
CTGCTGTCGG CCCGACCGAC CCGGCTGTTC ACCCGGGTGC CGGAGCCGAG CCTGCCGTTG
GCCGTCGACG CCCCCAGCAC ACCGACCCCG GCACCGACCG CACCGGCCAC CCCGGACACC
AGCCGCGCGC AGTACGGGCG GCCGGTCGAG CACGGCATCG AGGTCGCCGA CAAACGCCCC
GCCGAGCTGG AGGGGTCGCT GCGTCGGCTG GACGTCATCG CCCGCCAGTT GTACGCCGAC
CGCGGTTTGT GGACGCTCTA CACCGGCCTG TTGATGCTGC AGTGGATCGA CCCGGACGAC
AACGCCACCG TCACCAGCCC GGTCGTGCTG GTTCCGGTCG AGCTGACCCG AGCGGCCCGC
GACCAACCGT TCACCCTGCG GCGCAACGAC GAGGACCCGG TGCTCAACCC CACGCTGCGG
CTCAAGCTCA GTGAGCTGGG GATCGAGCTG CCGGCCTTCG ACGCCGACGA TCTGGACCTG
GCCGGGCTGC GGACGGCCAT CACCCAGGCG ATCGGCGATC GGCCCGGCTG GGCGGTGCTG
GACCGGTCGG TGCTGACCAC CTTCAGCTTC CAGAAGGAGG CGATGTACCG GGATCTCACC
GACAACGCGG CGAGGATCCT GGCCCACGCC CAGGTCCAGT TGCTGGGTCT GGGGCCCGAC
GCCCCGGCCT CCGGAGAGCT CGCGTTCGAC CCGCCCGACC CGGCCAGCCT GGACCAGCAG
TATCCGGCCG AGGAGCTGGC CAGCATCCTG GACGCCGACA GCAGCCAACG AGCGTGCATC
GTCTCGGCCC GCGATGGGCG CAGCTTCGTC ATGGACGGCC CGCCGGGCAC CGGCAAGAGC
CAGACGATCG CCAACATCAT CGCCGAGTTG ATGGCCGCCG GGAAGACGGT GCTGTTCGTC
AGCGAGAAGG CCGCCGCGCT GGACGTGGTG CGAGACCGGT TGACCCAGGC CCAACTCGGC
TCGTTCCTGT TCGAGCTGCA CTCGCACGCG GCGACCCGCA AGAACGTCGT CGACGACCTC
TACCGCACGC TGCAGCAGCA GGTGGCCACC AAGGCGCTGT TCACCGACAA CGACCGCCGG
TTGCTCGTCG CGATGCGCGA GCAGCTCACG CAGTACGCCA CGGCGATGAA CGAGGTCCGA
GAACCGCTGG GTCGCTCGGT GTTCGGTGTG CTGGGCGAGC TCAGCGAGCT TCCGCTGGTC
GCCCGCTCAC TGCCCACCGC GGACTTCTGG GCCGCCCTGG ACGACACGAC ACTGCGCCGG
ATCGCCGACC GGGCCGACAC CCTGTCCCGG AACTGGCGCC CGGTGCTCGA CGGGGAGGCG
TTCGGCTGGC GAGAGCTGGC GCAGGACAAC CACACCGAGT TCACCATCGC CGAGCTGATC
GCCGCGGTGA CCGATGCCGC GTCCTCCGCC GATGGCGTCG CCATGATCGG GGCCAGCGTC
GACGACGACA CCGGGCTGGT GCTGCCGATG AGCCTGCCCG CGCTGCGGGG CCGGGTGCGG
CTGCTGCAAC TGGCCGAACG GCGCCCGCCG GTGGCCGACG CCTGGTTGTT CCTGCCCGAC
CTGGCCCCGG TGGTCGAGCG GCTCGCCGCC CGAAAGTCGT TGGGTGGACA GCTGACCGCC
GCGCGAGCCG AACTGGGCGG GATCGTCGGC CCGCGGGCGG CACAGGTGGA CGACCCTGCG
CTGGAGGTCC TCGCCGGTCT GCGGGAGCTG ATGTGGGCCC CGACGGAGAC GACCACCACC
GACGTCGCCG GCGGGCTGCT GGACTTCCTG GACTCCGCCC CGGCCCGGCT CGCGGGCATC
GATGAGGACG CCATCCACCT GGCCGGGCTG CTCGGGCTGC CCGACCGAGG ACTCACGCTG
GGCCGGGCCC GGGCGTACGC CGAGTTGGCG CTGCTGGCCG AGAACCCGGC CAAGCCGCAA
CCCGGCTGGC TGAACCCGGC GATGCAGGCG GCGGTCGGGG AGTCCATGAC CGTGCTGGGT
CCGCTCACCG ATCTGGTCCG CCAGCACGAA CGCAGCATGC GCGAGGTGTT CACCGACGAG
GCCCTGGGTC TGGACCTGGC GGCGCTGAAC ACCCGGTTCC GCGAGTCGCA CCACGGATGG
GGGCGCTTCT CCGGTCAGTC CCGGGCCGAC CGGCGCACCC TCAAGGCCGT CACCGTCCGC
GGCAAGGTCG ACAAGCGGGT CATCGAAAGG CTTCCCGACG CGGTGGCCTG GCAGGCGGCG
ACCCGCGAGC TCACCACCAA GGAGCAGCAG TTCGCGCCGC CGCTGGGTCG GGCCTACACC
CGGTTGGATA CCGACTTCGC CCGGGTCGGC AACGCGTTGG AGACGGCCCG TCGGGCCGTC
GGGCTGGCCG GCGCGGCGGT CGACCCGGCC CGGCTGGCCC GCCAGCTGGC CGACGGTGGG
ACTCCCGACC CGGGGCTGAC GTTGGTCGCC CGGCGGTTGA CCGATCGGGT CGCCGACTGG
ATCCGGTCCA CCACGGCGGC GCTGGATCAG CCGGCGGTGC GGCAGATCGA GCACCTGTCG
TTGGCCGATA CCGCCCGCTG GTGCACCGAC CGGGCGGCGG ACCTGCGCGA ACCGCTGGCC
GCGGCCGGGC AGGTGGCCGA CCTGTGCGGC CGGCCCATCA GCCTGGCCCA GGCGCGGGCC
GCGCTCACTG CCGCCCGCCG CCGGGCCGAA TACGAGCGAG CCATCGAGAG CACCCGCGCC
CAGGACGAAG AGCTGCTCGG GCCCGGTTAC ACCGGGGCCG ACACCGAGTG GGCGGCGATG
GATGCCGCGA TCGAATGGGC CCGTCAGGTG CGCGAGGTCG CCGGTGGGTC GGTCAGTCCG
GCGACCGCGG AACGGCTGTC GTCGCTGACC CTGGACTCGG GTCTGCTCGG CGGGGCCATC
GAGGACTGGG AACGGGCCCG CGACCGGGTG CTGGCCGCCT TCACTGAACC GCGGGCCCGC
GAGCTGGCCG CCGACCTCGA GCTGGATCTG CGCCAGTCGG CCCAGGCCCT GCGCGAGATG
GCCGACAGCG CCTACGGGGA CATCACGCAG TGGTGCACCT TCGCCCAGCA GCGCACGGCG
CTGACCGACC TGCACCTCGG CCCGGCCGTG CAGGCGGTCG CCGACGCCCA GACCCCGGCC
GAGCAGGTGC CCGGCGCGAT CGAGGCCGCC GCCCTGCGAG CCTGGCTGGA CACCACGATC
GAACGGGACG AGCGGCTGCA CCGCTACCAG GCGGCCGAAC GCGATGCCCT GGTCACCCAG
TACCGGGAGC TGGACCGGCG GATCGTCAAC CAGGCCAACA CCCTGGTCGC CGCCCGCTGC
GGCGAGCGGC GGCCGCGGTC GTTGACCGGC CGGCCGGCGC AGATCATCAC CCGGGAGGCC
AACAAGAAGA CCCGGCACAA GCCGATCCGG CAGCTGCTGG ACGAGGTCGG CAGCCTGGTC
ACCGAGCTCA AGCCCTGTTT CATGATGAGC CCGCTGACCG TCTCGATGTT CCTCACGCCC
GAGATGCGCT TCGACGCGGT CATTTTCGAC GAGGCCTCGC AGGTGGTCCC GGCGGACGCG
GTCAACTGCA TCTACCGCGG GGACCAGCTG ATCGTGGCCG GGGACCAGAA GCAGTTGCCC
CCCACCGACT TCTTCGCGCG GGCCGAGGAC GCCGACTTCG ACGTGGCCGC CGACGCCGGC
GAGGGGCAGC TGCCGGACCC GGCCGCGCTG GACACCTTCC AGTCCGTGCT GGATTTGTGC
AAGGCCGCTG GCGGGCTCAG CTCGCTGCCC CTGACCTGGC ATTACCGCAG CCGGCACGAG
GACCTGATCA CCTACTCGAA CTACCGGTTC TACGACGGCA GCCTGCGCAC CTTCCCCAGC
GCCGCGTTCG ACAGCGCCGA CCTGGGCGTC GAGCACTTCC TGGTCGAGGG CCGTTACCGC
CGCGGCGGAC CCCGGGACAA CCCGGTGGAG GCACGCAAGG TCGCCGAGCT GGTCGCCCAC
CACGTGCACA CCCGACCCCA TCTGTCCCTG GGGGTGGTCA CCTTCTCCAC CGCGCAGGAG
GACGCCGTCC GGGCCGCGAT CGAGGCGTCG GACGAACCGG AGGTCGCCGA GCTGCTCGAG
CAACACGACC GGCTCGGCGG GTTCTTCGTC AAGAGCCTGG AGAACGTGCA GGGCGACGAG
CGGGACGTGA TCATCTTCAG CATCGGTTAC GGACCCGACG AGCACGGCAA GTTCACGATG
AACTTCGGCC CGCTGAACCG CGAAGGTGGT TGGCGACGGC TCAATGTCGC GATCACCCGG
GCCCGGCGCC GGGTGGAGAT CGTCAGCTCG TTCGCCCCGG CCCAGATCAC CGGAGTCAGT
TCGGCCGGGC CGCTGCACCT GCGCGGCTAC CTGGACTTCG CCGACCGCGG TGCGGCCGCC
CTCGCGCACG ACGCGCCCGC CTCGGGCGGC GACGCGGAGA GCGTCTTCGA GGAGCAGGTG
GCCCAGGTGA TCCGGTCCTG GGGTTATCCG GTGCACACCC AGGTCGGGGC GGCCGGATAC
CGCATCGATC TGGCCGTGCT GCACCCGGAC CGTCCAGGAG AGTACCTGCT GGGTGTCGAA
TGTGACGGCG CCGCTTACCA TTCCGCGCGC ACGGCGCGCG ATCGCGACCG GCTGCGCGAG
CAGGTCCTGG TCGGCCTGGG CTGGCGGATC CACCGGATCT GGGGTTTGAG CTGGTGGCGC
GACCGGTCCA CGCAGCAGGA CCGGCTGCGG GCGGCCATCG AGGCGGCCAT GCAGTCCACC
GACCGGGCCG GCGTCGACGA TGTCACCCAC ACCGGCCGCA GCCATCCCGC TGACGAGTCC
TCGGTGACCG AAATCGCGCG TGCCGCCATC GAATTCGACG AGCTGGATCC GCCGGCCGTG
CCCAGCTGGG CGCAGCCGTA CCGGCCGGCG GCCCACCGCG GGTCGGAGCG GCAGGCCGAT
CCACGTTCCC CCGAGGCCCG TCCCGCCCTC CGTCGCTTCT TCGAAGGCGC GCTGCGGGCC
GAGGCCCCGG TGCACGAGAC GGTGCTGCTG GCCCGGTTCC GGGAGGCCTG GGGGATCGGC
CGGTTGGGGG CACAGGTTCG GTCCAACGCC GAGTACGTGC TGTCCCGGGT GCGGGTCGAC
GGCCAGGAGG TCCGGCGGGA CCCGGCTGGT TTCTACCGGG TCGACGGCGC GCCGCTGGCG
GTCGTCCGGG TGCCCACCGA GTCCACGACC GTCCGTCCGG CGCTGGCCAT TCCGCCCGAG
GAGATCGACC TGGCCGTCGT CGGCACCGTC CGCGACGCCA TCGTCATCGA GGAGGACCAG
CTTCCGGTGG CCGTGGCCCG GTTGTTCGGC TGGCAGCGGA CCGGGCCGGA CATCCAGAAC
ACCATTGCCG CCTCGCTGTC CCGGATGGTG CAGCAGGGCC GGGTGCAGCG CAACGCGCGG
CGAGAGCTGC GGCTGGGCGA CTGA
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| Protein sequence | MPDGPTPTLS SAQADKLGRQ LDAWRRQLVA LDRRQRQLYF KHTRTASLEL VDPGPDDLAI
LLSARPTRLF TRVPEPSLPL AVDAPSTPTP APTAPATPDT SRAQYGRPVE HGIEVADKRP
AELEGSLRRL DVIARQLYAD RGLWTLYTGL LMLQWIDPDD NATVTSPVVL VPVELTRAAR
DQPFTLRRND EDPVLNPTLR LKLSELGIEL PAFDADDLDL AGLRTAITQA IGDRPGWAVL
DRSVLTTFSF QKEAMYRDLT DNAARILAHA QVQLLGLGPD APASGELAFD PPDPASLDQQ
YPAEELASIL DADSSQRACI VSARDGRSFV MDGPPGTGKS QTIANIIAEL MAAGKTVLFV
SEKAAALDVV RDRLTQAQLG SFLFELHSHA ATRKNVVDDL YRTLQQQVAT KALFTDNDRR
LLVAMREQLT QYATAMNEVR EPLGRSVFGV LGELSELPLV ARSLPTADFW AALDDTTLRR
IADRADTLSR NWRPVLDGEA FGWRELAQDN HTEFTIAELI AAVTDAASSA DGVAMIGASV
DDDTGLVLPM SLPALRGRVR LLQLAERRPP VADAWLFLPD LAPVVERLAA RKSLGGQLTA
ARAELGGIVG PRAAQVDDPA LEVLAGLREL MWAPTETTTT DVAGGLLDFL DSAPARLAGI
DEDAIHLAGL LGLPDRGLTL GRARAYAELA LLAENPAKPQ PGWLNPAMQA AVGESMTVLG
PLTDLVRQHE RSMREVFTDE ALGLDLAALN TRFRESHHGW GRFSGQSRAD RRTLKAVTVR
GKVDKRVIER LPDAVAWQAA TRELTTKEQQ FAPPLGRAYT RLDTDFARVG NALETARRAV
GLAGAAVDPA RLARQLADGG TPDPGLTLVA RRLTDRVADW IRSTTAALDQ PAVRQIEHLS
LADTARWCTD RAADLREPLA AAGQVADLCG RPISLAQARA ALTAARRRAE YERAIESTRA
QDEELLGPGY TGADTEWAAM DAAIEWARQV REVAGGSVSP ATAERLSSLT LDSGLLGGAI
EDWERARDRV LAAFTEPRAR ELAADLELDL RQSAQALREM ADSAYGDITQ WCTFAQQRTA
LTDLHLGPAV QAVADAQTPA EQVPGAIEAA ALRAWLDTTI ERDERLHRYQ AAERDALVTQ
YRELDRRIVN QANTLVAARC GERRPRSLTG RPAQIITREA NKKTRHKPIR QLLDEVGSLV
TELKPCFMMS PLTVSMFLTP EMRFDAVIFD EASQVVPADA VNCIYRGDQL IVAGDQKQLP
PTDFFARAED ADFDVAADAG EGQLPDPAAL DTFQSVLDLC KAAGGLSSLP LTWHYRSRHE
DLITYSNYRF YDGSLRTFPS AAFDSADLGV EHFLVEGRYR RGGPRDNPVE ARKVAELVAH
HVHTRPHLSL GVVTFSTAQE DAVRAAIEAS DEPEVAELLE QHDRLGGFFV KSLENVQGDE
RDVIIFSIGY GPDEHGKFTM NFGPLNREGG WRRLNVAITR ARRRVEIVSS FAPAQITGVS
SAGPLHLRGY LDFADRGAAA LAHDAPASGG DAESVFEEQV AQVIRSWGYP VHTQVGAAGY
RIDLAVLHPD RPGEYLLGVE CDGAAYHSAR TARDRDRLRE QVLVGLGWRI HRIWGLSWWR
DRSTQQDRLR AAIEAAMQST DRAGVDDVTH TGRSHPADES SVTEIARAAI EFDELDPPAV
PSWAQPYRPA AHRGSERQAD PRSPEARPAL RRFFEGALRA EAPVHETVLL ARFREAWGIG
RLGAQVRSNA EYVLSRVRVD GQEVRRDPAG FYRVDGAPLA VVRVPTESTT VRPALAIPPE
EIDLAVVGTV RDAIVIEEDQ LPVAVARLFG WQRTGPDIQN TIAASLSRMV QQGRVQRNAR
RELRLGD
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