Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_1084 |
Symbol | |
ID | 8446680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 1204728 |
End bp | 1205471 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 645040222 |
Product | putative transmembrane anti-sigma factor |
Protein accession | YP_003200481 |
Protein GI | 258651325 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.0936076 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCCAGC AGCCGGCCGA TGACGACCTG CTCTGTCACG ACGACGCCGC CTACGTGCTG GGCGCGCTGT CCGCGGCCGA CCGCCGGGCG TACGAGGAGC ACCTGCGGGA GTGCCAGACC TGTCAGGCCT CGGTGCGCCG CCTGGCCGGA ATGCCCGGCC TGCTGGCGTT GGCCGCCCCG GACGCGATCG GCGATGCGGA CCCACCGGTG CCGCCGTCCC TGCTGCCCAC CCTGCTGCGG CGCGCGCGCC GCGCCGACCG GCGGCGCCGC CGGTTGGTCG GCGGGGTGGT CGGTGGGCTG GCGGCGGCGA CGGCCGTGCT GCTGGTGGTG CTCGTCTGGG CGATCGCCCG GCCCGGCGCG GCCCCGACGA ACAGCGCGGA CGCGGGGACC TCGACCAGTG CCTCGGCCGG GTCGAGCGCC GGCCCGATCG CCGCACCGGA CGAAACGGTG CCGCTGGACC AGGTGCTGCC CGGGCCGATG ACCGCCACCC TGGAGCTGGA CGACAAGCGC TGGGGGACGG CGATCACCGT CGTCTGCTCG TACGAGCAAT CGATGCGGGG GTCCGTCCCC TACGACCTGG CCGTCGTCGA CACCGACGGG CAGGTGACCT CGGCCGGCTC TTGGAGCGGG GTGCCGGGGG TGACCGCCCG CGTGCCGGTG GCCACCGCGG TGACCCGCGA CCACATCTCG GCGTTCGAGA TCCGGTTGGC CGACGGCCGG ACCATTCTTC GCGGTTCGCC GTAG
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Protein sequence | MTQQPADDDL LCHDDAAYVL GALSAADRRA YEEHLRECQT CQASVRRLAG MPGLLALAAP DAIGDADPPV PPSLLPTLLR RARRADRRRR RLVGGVVGGL AAATAVLLVV LVWAIARPGA APTNSADAGT STSASAGSSA GPIAAPDETV PLDQVLPGPM TATLELDDKR WGTAITVVCS YEQSMRGSVP YDLAVVDTDG QVTSAGSWSG VPGVTARVPV ATAVTRDHIS AFEIRLADGR TILRGSP
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