Gene Namu_1084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1084 
Symbol 
ID8446680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1204728 
End bp1205471 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content76% 
IMG OID645040222 
Productputative transmembrane anti-sigma factor 
Protein accessionYP_003200481 
Protein GI258651325 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.0936076 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCAGC AGCCGGCCGA TGACGACCTG CTCTGTCACG ACGACGCCGC CTACGTGCTG 
GGCGCGCTGT CCGCGGCCGA CCGCCGGGCG TACGAGGAGC ACCTGCGGGA GTGCCAGACC
TGTCAGGCCT CGGTGCGCCG CCTGGCCGGA ATGCCCGGCC TGCTGGCGTT GGCCGCCCCG
GACGCGATCG GCGATGCGGA CCCACCGGTG CCGCCGTCCC TGCTGCCCAC CCTGCTGCGG
CGCGCGCGCC GCGCCGACCG GCGGCGCCGC CGGTTGGTCG GCGGGGTGGT CGGTGGGCTG
GCGGCGGCGA CGGCCGTGCT GCTGGTGGTG CTCGTCTGGG CGATCGCCCG GCCCGGCGCG
GCCCCGACGA ACAGCGCGGA CGCGGGGACC TCGACCAGTG CCTCGGCCGG GTCGAGCGCC
GGCCCGATCG CCGCACCGGA CGAAACGGTG CCGCTGGACC AGGTGCTGCC CGGGCCGATG
ACCGCCACCC TGGAGCTGGA CGACAAGCGC TGGGGGACGG CGATCACCGT CGTCTGCTCG
TACGAGCAAT CGATGCGGGG GTCCGTCCCC TACGACCTGG CCGTCGTCGA CACCGACGGG
CAGGTGACCT CGGCCGGCTC TTGGAGCGGG GTGCCGGGGG TGACCGCCCG CGTGCCGGTG
GCCACCGCGG TGACCCGCGA CCACATCTCG GCGTTCGAGA TCCGGTTGGC CGACGGCCGG
ACCATTCTTC GCGGTTCGCC GTAG
 
Protein sequence
MTQQPADDDL LCHDDAAYVL GALSAADRRA YEEHLRECQT CQASVRRLAG MPGLLALAAP 
DAIGDADPPV PPSLLPTLLR RARRADRRRR RLVGGVVGGL AAATAVLLVV LVWAIARPGA
APTNSADAGT STSASAGSSA GPIAAPDETV PLDQVLPGPM TATLELDDKR WGTAITVVCS
YEQSMRGSVP YDLAVVDTDG QVTSAGSWSG VPGVTARVPV ATAVTRDHIS AFEIRLADGR
TILRGSP