Gene Namu_1071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1071 
Symbol 
ID8446667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1190328 
End bp1191248 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content72% 
IMG OID645040209 
Productperiplasmic solute binding protein 
Protein accessionYP_003200468 
Protein GI258651312 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACCC GCGTGCTGGC CGCCGCCCTG ACCTCCATCC TGGGCGCCGT CCTGGGCGTG 
GCCGGCTGCG CGACGGCGGC CGGTTCGGAC CGCCCCTCGG TCACCGTGAC CACCACCATT
CTCGGTGACG TGGTCAATGA GATCGTCGGT GACCAAGCCG ATGTCGTAGT TCTGATGCCC
GGCGGTGGGG ATCCGCACTC ATTCTCGATC TCCGCCCAGG AAGCGGCGCG CATGCGCCAG
TCGGACCTGA TCGTGTCCAA CGGCCTCGGG CTGGAAGAGG GCGTCGCGAC CCAGGTGCAG
GCCGCGGCCG CGGACGGCAC GCCCCAGTTC GTCGCCGGCG ACCAGGCCGA TCCGCTCACC
TTCATCGCGG ACGGCTCGTC GGGCCTGCCC GACCCCCACT TCTGGACCGA CCCGGACCGC
ATGGTGCTGG TGCTGGACGC CCTCGACGAC GCCCTGGCCG GGATCGAGGG CATCGACGCC
GAGCAGCTCA CCCAGCGGGC GGCGAAGTAC CGCGCCGAGC TGGCGGCGCT GTCCGCCGAG
ATGGACACCT TCTTCGCCGC CATCCCGCCG GGCCGGCGGG CCCTGGTCAC CAACCACCAC
GTCTTCGGCT ACCTCGCCCA GCGCTTCGGC TTCGAGGTGG TCGGCGCCGT CATCCCCAGC
GGGACCACCC TGGCCGCGCC CAGCGCCGCG GACCTGGCCG ACCTGGCCGG CGCCATCCGG
GACACCGGGG TGCCGGCGAT CTTCGCCGAC TCATCCCGGC CGGACCGGCT GGCCCAGGCG
GTGGCCGAGG AAACCGGGTT GGACATCGAG GTCGTCCCGC TGTTCACCGA GTCGCTCTCG
CCGCCCGGCG AAGGGGCCGG TACCTACTTG GACATGATGC GCACCAACAC ATCCCGGATC
ACCGCGGCGC TGACCCGGTG A
 
Protein sequence
MRTRVLAAAL TSILGAVLGV AGCATAAGSD RPSVTVTTTI LGDVVNEIVG DQADVVVLMP 
GGGDPHSFSI SAQEAARMRQ SDLIVSNGLG LEEGVATQVQ AAAADGTPQF VAGDQADPLT
FIADGSSGLP DPHFWTDPDR MVLVLDALDD ALAGIEGIDA EQLTQRAAKY RAELAALSAE
MDTFFAAIPP GRRALVTNHH VFGYLAQRFG FEVVGAVIPS GTTLAAPSAA DLADLAGAIR
DTGVPAIFAD SSRPDRLAQA VAEETGLDIE VVPLFTESLS PPGEGAGTYL DMMRTNTSRI
TAALTR