Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_1071 |
Symbol | |
ID | 8446667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 1190328 |
End bp | 1191248 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 645040209 |
Product | periplasmic solute binding protein |
Protein accession | YP_003200468 |
Protein GI | 258651312 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCACCC GCGTGCTGGC CGCCGCCCTG ACCTCCATCC TGGGCGCCGT CCTGGGCGTG GCCGGCTGCG CGACGGCGGC CGGTTCGGAC CGCCCCTCGG TCACCGTGAC CACCACCATT CTCGGTGACG TGGTCAATGA GATCGTCGGT GACCAAGCCG ATGTCGTAGT TCTGATGCCC GGCGGTGGGG ATCCGCACTC ATTCTCGATC TCCGCCCAGG AAGCGGCGCG CATGCGCCAG TCGGACCTGA TCGTGTCCAA CGGCCTCGGG CTGGAAGAGG GCGTCGCGAC CCAGGTGCAG GCCGCGGCCG CGGACGGCAC GCCCCAGTTC GTCGCCGGCG ACCAGGCCGA TCCGCTCACC TTCATCGCGG ACGGCTCGTC GGGCCTGCCC GACCCCCACT TCTGGACCGA CCCGGACCGC ATGGTGCTGG TGCTGGACGC CCTCGACGAC GCCCTGGCCG GGATCGAGGG CATCGACGCC GAGCAGCTCA CCCAGCGGGC GGCGAAGTAC CGCGCCGAGC TGGCGGCGCT GTCCGCCGAG ATGGACACCT TCTTCGCCGC CATCCCGCCG GGCCGGCGGG CCCTGGTCAC CAACCACCAC GTCTTCGGCT ACCTCGCCCA GCGCTTCGGC TTCGAGGTGG TCGGCGCCGT CATCCCCAGC GGGACCACCC TGGCCGCGCC CAGCGCCGCG GACCTGGCCG ACCTGGCCGG CGCCATCCGG GACACCGGGG TGCCGGCGAT CTTCGCCGAC TCATCCCGGC CGGACCGGCT GGCCCAGGCG GTGGCCGAGG AAACCGGGTT GGACATCGAG GTCGTCCCGC TGTTCACCGA GTCGCTCTCG CCGCCCGGCG AAGGGGCCGG TACCTACTTG GACATGATGC GCACCAACAC ATCCCGGATC ACCGCGGCGC TGACCCGGTG A
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Protein sequence | MRTRVLAAAL TSILGAVLGV AGCATAAGSD RPSVTVTTTI LGDVVNEIVG DQADVVVLMP GGGDPHSFSI SAQEAARMRQ SDLIVSNGLG LEEGVATQVQ AAAADGTPQF VAGDQADPLT FIADGSSGLP DPHFWTDPDR MVLVLDALDD ALAGIEGIDA EQLTQRAAKY RAELAALSAE MDTFFAAIPP GRRALVTNHH VFGYLAQRFG FEVVGAVIPS GTTLAAPSAA DLADLAGAIR DTGVPAIFAD SSRPDRLAQA VAEETGLDIE VVPLFTESLS PPGEGAGTYL DMMRTNTSRI TAALTR
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