| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1052 |
|---|
| Symbol | |
|---|
| ID | 8446648 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 1162906 |
|---|
| End bp | 1163565 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 645040190 |
|---|
| Product | Peptidoglycan-binding LysM |
|---|
| Protein accession | YP_003200449 |
|---|
| Protein GI | 258651293 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCATTGA CCGAAAAGGC TTTCCTGGAG ATCGAGGGCC GCGCGGACAC CATCCCGTGT
ATGTTCAACC CGGCGGAACT GACGGTCTCG CGGACGAACT CGTGGCGCGC CGACTCGATC
GGCGGCCAGG GTGTCGGCCA GGTCCGCTAC CTGGGTGCGC AGTCCGGCGA GATGCGGTTG
ACCCTGCACT TCGACACCAC CGACACCGGC CAGTCCGTCG GCCAGCACAC CGGCAAGGTG
CTCAAGCTGA TGGACGTCGA CTCGTCGCTG CCGGGCACCG ACGCGCAGAG CAACAACGCC
CGGCCGCCGT ACGTGGTGTT CCACTGGGGC AACCTGCACT CGTTCAAGGC GGTCGTCACC
GATCTGACGC TGCGGTTCAC CTACTTCTCC TCGACCGGGG TGCCGCTGCG CGCCGAGGTC
GACCTGAGCC TGCGCCAGTT CGCCCCGTCG GACGCGTTCG GTCCGCAGAA CCCGACCTCC
GGCACCCCGA ACCCGCACCG GGTGCACCGG GTCCAACCCG GCGAGACCCT CGATCGGATC
TCGGCCAAGT ACTACGGCGA TTCCACCCGC TGGCGGCAGA TCGCCGGCGC CAACGCCATT
GCCGATCCGC TCGCGCTGCG GCCGGGTTCC CTGCTGTCCA TCCCGGGAGG CACCGAATGA
|
|---|
| Protein sequence | MPLTEKAFLE IEGRADTIPC MFNPAELTVS RTNSWRADSI GGQGVGQVRY LGAQSGEMRL
TLHFDTTDTG QSVGQHTGKV LKLMDVDSSL PGTDAQSNNA RPPYVVFHWG NLHSFKAVVT
DLTLRFTYFS STGVPLRAEV DLSLRQFAPS DAFGPQNPTS GTPNPHRVHR VQPGETLDRI
SAKYYGDSTR WRQIAGANAI ADPLALRPGS LLSIPGGTE
|
|---|
| |