Gene Namu_1039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1039 
Symbol 
ID8446635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1148330 
End bp1149145 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content76% 
IMG OID645040177 
ProductHpcH/HpaI aldolase 
Protein accessionYP_003200436 
Protein GI258651280 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGACGC CGGTCAGCTA CCTGTTCGTG CCGGGCCATC GCCCCGATCT GATCGCCAAG 
TCGGCCCGCT CCGGGGCCGA CGCGGTGGTC GTCGATCTGG AGGATGCCGT GGCCCCGGCC
GATCGCCCCG CCGCCCGGGC CACCGTCCGC GAGGCCCTGC TGGCCCGGCG GGAAGCGCCC
ACCGGACAGC AGTGTTGGGT CCGGATCAAC CAACCGGGCA CCGCGGACGC CGAGGCCGAC
CTGGCCGCCC TCGGCGACCT GCTCACCCAC GCCCGGGTGC CCAAGGTGGA CGACCCGGCG
CAGATCGACT GGGTTGCCGC GCGGGCCCCG CACCTTCGCA CCACCCTGCC GGCCATCGAG
TCGGCGGCCG GGCTGCTCGC CGCGCCGGCG ATCGCGGCCC ATCCGCGGGT CTGCCGGCTG
GGTCTGGGCG GCGTGGATCT GGCCAACGAC CTGGGCTGCG ACGGCAGTGC CGCGGCGCTG
GCCTACCCCC GGTCGGTGCT GGTGGTCGCC TCGCGCGCGG CCGGCCTGCC CGGCCCGGTG
AACAGCGTCT ACGCCAAGCT CGATGATCCG GAGGGTCTGC TCGCGCACGC GCGGGCGGCC
CGGGCGATCG GGTTCGGCGC CCAGTCGGCG CTCACCCCGC GGCAGCTGCC GGCGATCACC
CAGGTGTTCG GTCTGGCCCC CGAGCGGATC ACCTGGGCCC GGGAGGTGCT CGACGCGTTC
CGCGCGGCCG GGGGCGCCGC CTGCCGCACC CCCTCCGGTG ACTTCGTCGA CCTGCCGGTG
GCCCAGGAGG CGCAGCGGAT CCTGGCCGCG GTCTGA
 
Protein sequence
MRTPVSYLFV PGHRPDLIAK SARSGADAVV VDLEDAVAPA DRPAARATVR EALLARREAP 
TGQQCWVRIN QPGTADAEAD LAALGDLLTH ARVPKVDDPA QIDWVAARAP HLRTTLPAIE
SAAGLLAAPA IAAHPRVCRL GLGGVDLAND LGCDGSAAAL AYPRSVLVVA SRAAGLPGPV
NSVYAKLDDP EGLLAHARAA RAIGFGAQSA LTPRQLPAIT QVFGLAPERI TWAREVLDAF
RAAGGAACRT PSGDFVDLPV AQEAQRILAA V