Gene Namu_1037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1037 
Symbol 
ID8446633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1145460 
End bp1146959 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content67% 
IMG OID645040175 
Productcitrate/H+ symporter, CitMHS family 
Protein accessionYP_003200434 
Protein GI258651278 
COG category[C] Energy production and conversion 
COG ID[COG2851] H+/citrate symporter 
TIGRFAM ID[TIGR00784] citrate transporter, CitMHS family 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCATCG CCCTCGGCTG CGTGATGATC GCAGTCTTCA TGTACTTGAT TCTGAGTAAG 
AGAATCGTAC CGGTGATCGC ACTGATTCTG GTGCCGATCA CCATGGGCCT GGTTGCGACC
GGGACCGGAA TTGCCGAAGA CGTTGAGGGC GGCGTCACCG GCGCCATCAT GAAGGCCGTC
AAGGACTTCG CGCCGACCGC GGCGCTGCTG TTCTTCGCCA TCATCTACTT CGGCCTGATG
ATCGACGTGG GCCTGTTCGA TCCGCTGATC CGCTTCATCC TGCGGGTGGT CGGCAACAGC
CCGGTGAAGG TCGTCCTGGG CACCGCCCTG CTGGCCGGTG CGGTCTCCCT GGACGGCGAC
GGCTCCACCA CCTTCATCAT CACCGTCTCG GCCCTGCTGC CGATCTACCG CCGGCTGGGA
ATGAGCCCGG TCGTGCTCTG CGTGGTCGCC AACCTGGCCA ACGGGGTGCT CAACATCGTG
CCCTGGGGCG GCCCGACGAT CCGGGCCGCG ACGGTGCTGA ACGTCTCGCC CTCCGAACTG
TTCAACCCGA TGGTGCCGGG CATGATCATG GGCATCCTCA CCGTCTTCGT GTTGGCCTAC
TTCCTGGGCC GGAGCGAGAA GAAGCGTCTG CTCAAGTCGG GGGCGACCCT GGAGACGGTG
GCGGCCGAGC TGCGTGGCGG CTCCGGCGGG GGTACCGGCA CCGCGGTGCT GACCGGCCCC
GGCGCCGGTG GCGGCACCGG CACGACCACC GGGGGCGACT TCCCGCCGGT CCCGCCGGCC
AACCTGAACC TGTCCTCGAT CGCCCGCTCC GAGCTGGGCG TCACCGACAA CGACGAGCAC
TCCGACATGG AGGACGGCCT CGATCCGAAC CGGAAGACCC TGCGGCCCAA GCTGATCTGG
TTCAACCTGG CGCTGACCGT CGGCCTGCTG GTCTGCCTCG GGCTGGACAA GCTGCCTTTG
GCCCTGGTGT TCATGGTTGC CGCCGCGGTC GCGCTGGTGG TCAACTTCCC GCAGCAGAAG
GATCAGGCCG ACCGGATCAC CGCGCACGCC ACCTCCATCG TCTCGGTGGT CGCCATGGTG
TTCGCCGCCG CGGTACTGGT GGGTGTGCTC TCCGGCACCG GCATGGTGAC CGCGATGGCC
AACGGCATCG TCTCCGCCGT CCCGGAACCG CTGGGTCCGT ACTTCGCCGT GATCACCGCG
ATCCTGTCCA TGCCGCTGAC GTTCTTCCTG ACCAACGACG CGTTCTACTT CGGCATCCTG
CCGATCCTGT CGCAGGCCGC CGGTCACTAC GGGATCTCCC CGGTGGAGAT GGCGCAGGCG
TCGATCATCG GCCAGCCGGT GCACATGACC AGCCCGCTGG TCCCGGCCAT GTTGCTGCTG
ATCTCGCTGG CTCGGGTGCA GATGGCCGAC CATCACAAGA AGGTCATCTG GCGGGCCGTC
GTCTGCTCGA TGGTCATGCT GGCCACGGCC CTGGTCCTGG GCGTCATCCC GGTCGGCTGA
 
Protein sequence
MLIALGCVMI AVFMYLILSK RIVPVIALIL VPITMGLVAT GTGIAEDVEG GVTGAIMKAV 
KDFAPTAALL FFAIIYFGLM IDVGLFDPLI RFILRVVGNS PVKVVLGTAL LAGAVSLDGD
GSTTFIITVS ALLPIYRRLG MSPVVLCVVA NLANGVLNIV PWGGPTIRAA TVLNVSPSEL
FNPMVPGMIM GILTVFVLAY FLGRSEKKRL LKSGATLETV AAELRGGSGG GTGTAVLTGP
GAGGGTGTTT GGDFPPVPPA NLNLSSIARS ELGVTDNDEH SDMEDGLDPN RKTLRPKLIW
FNLALTVGLL VCLGLDKLPL ALVFMVAAAV ALVVNFPQQK DQADRITAHA TSIVSVVAMV
FAAAVLVGVL SGTGMVTAMA NGIVSAVPEP LGPYFAVITA ILSMPLTFFL TNDAFYFGIL
PILSQAAGHY GISPVEMAQA SIIGQPVHMT SPLVPAMLLL ISLARVQMAD HHKKVIWRAV
VCSMVMLATA LVLGVIPVG