Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_0891 |
Symbol | |
ID | 8446483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 983252 |
End bp | 984508 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 645040028 |
Product | Integrase catalytic region |
Protein accession | YP_003200291 |
Protein GI | 258651135 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGTCTC GGGCGGAGAT CACCACCAGG TACGCCAAGG CGTTCAAGGC TGCGGACAGG CGTACGAAGG GCCGGATCCT GGACGAGGTG GTGTCCGTGA CGGGCTGGTC GCGGGACAAC GCCCGGCGAC GGTTGACCAG CGCCGCGCAG TGCCCGCCGG GCGGCGGCCG ACAGGTCGCC CAGCGGCCCA GGAAGCAGCG GGCGAACAAG TTCTCCTACG AGGCGTTAAA GGTCCTCCAG CGGGTCTGGG CGGCTTCCGG TGGGCAGTGC GGCAAGTACC TGGCCGCATC GATGGACACG CAACTGGACG GGCTGGAACG GCACGGGGAG CTGGTCGACG GCGAGGGCCG GTACAGCGCT TCGGTGCGGG CCGAGCTGCT CGCGATGTCG CCGGCGACGA TCGACCGCTA CCTGCGGACC GCGAAGGCCA CCGACCAGGT CCGCGGTGTC TCGACCACGA AACCGTCACC GTTGCTGCGG TCCTCGATCA AGATCCGTAA GGCGGGCGAC GAGGTCGAGG CCGAGCCCGG CTTCTTCGAG GGCGACACGG TTGCGCATTG CGGCCCGACC CTGCGGGGCG AGTTCGCTCG CTCGGTGAAC CTGACCTGTG TGCATACCGG GTGGGTCTTC ACCCGCTCGA CGCGCAACAA CGCGCACGCC AACATCCTGG CCGCGCTGCA GGCCGGGGTG CAGGAGATCC CTTTCGCGGT CACCGGTCTG GACTTCGACA ACGGAGGTGA GTTCCTGAAC CGGGCCGTCA TCAAATGGGC CGCCGAGCAA GACATCTACT TCACCCGGTC CCGGCCGTAC AAGAAGAACG ACCAGGCCAC GATCGAGTCG AAGAACAACC ACCTGGTCCG CCGGTACGCG TTCTACTACC GGTACGACAC CGACGAGGAA CGACACGCGT TGAACCGGCT CTGGAAGCTG GTCAACGACC GGCTCAACTA CCTCACCCCG ACGATCAAGC CGGTCGGCTG GGGCGAGAAC AAGGCCGGTC GCCGCAAACG CCTTTACGAC AAGCCGCAAA CCCCGTTGAG TCGGCTGCTG GCCGCCGGCA CGCTGTCGCC GGCGCAAGCC CACGAACTGA CCGCCTACCG GGACGGGCTC AACCCGGCCG CGCTCGCCCG TGAGATCGCC GGCATTCAGG CCGTGCTGCT GGGCCTGGCC AAGAACAAGA CCGAGCAGCT CTACCTCGCG ACCGTCCCCA AGGCACTGCC CGACGTGCGC AAAGGCGTCC GGATCAGGGC CGGCTGA
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Protein sequence | MASRAEITTR YAKAFKAADR RTKGRILDEV VSVTGWSRDN ARRRLTSAAQ CPPGGGRQVA QRPRKQRANK FSYEALKVLQ RVWAASGGQC GKYLAASMDT QLDGLERHGE LVDGEGRYSA SVRAELLAMS PATIDRYLRT AKATDQVRGV STTKPSPLLR SSIKIRKAGD EVEAEPGFFE GDTVAHCGPT LRGEFARSVN LTCVHTGWVF TRSTRNNAHA NILAALQAGV QEIPFAVTGL DFDNGGEFLN RAVIKWAAEQ DIYFTRSRPY KKNDQATIES KNNHLVRRYA FYYRYDTDEE RHALNRLWKL VNDRLNYLTP TIKPVGWGEN KAGRRKRLYD KPQTPLSRLL AAGTLSPAQA HELTAYRDGL NPAALAREIA GIQAVLLGLA KNKTEQLYLA TVPKALPDVR KGVRIRAG
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