Gene Namu_0794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0794 
Symbol 
ID8446383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp875000 
End bp875785 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content70% 
IMG OID645039929 
Product4-oxalocrotonate decarboxylase 
Protein accessionYP_003200195 
Protein GI258651039 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3971] 2-keto-4-pentenoate hydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCA CGAGCATCAC CCCCGACGAG ATCGCGCAGG TCCTGCTGGC CGGGGAGCGC 
AACCGCACCG AGGTGGCCCA GTTCAGTGCC AGCCACCCCG ATCTCGACGT GCGCACCGCC
TACGCCGCCC AGCGGGCCTT CGTGCAGGCC AAGCTGGACG CCGGCGAGCA GCTGGTCGGC
TACAAGCTCG GCCTGACCAG CCGCAACAAG CAGCGGGCGA TGGGCGTGGA CTGCCCGCTG
TACGGGCGGG TGACCAGCTC CATGCTCGCG ACGTACGGCG ACCCCATCCC CTTCGACCGG
TTCATCCATC CGCGGGTCGA GTCCGAGATC GCCTTCCTGC TCAAGCAGGA CGTGACCGCA
CCGGCCACGG TGAGCTCGGT GCTGGCCGCC ACCGACGTGG TCTTCGGCGC CGTGGACGTG
CTGGATTCCC GGTACGAGGG GTTCAAGTTC ACCCTGGAGG ACGTGGTCGC CGACAACGCG
AGCGCGGGCG CCTTCTACCT CGGGCCGGTG GCCCGCCCGG CCACCGAACT GCGGCTGGAT
CTGCTCGGCT GCATCGTCCG GGTCGACGGC GAGGTGACGA TGACGGCGGC CGGTGCCGCG
GTGATGGGTC ACCCCGCGGC CGCGGTCGCG TGGTTGGCCA ATCAGCTGGC GCTGGAGGGC
GAATCGCTCA AGGCCGGCCA GTTGATCTTC TCGGGCGGGG TGACCGCGCC GGTCCCGGTG
GTGCCCGGTG GCAGCGTGAC GTTCGAGTTC GACGGTCTCG GTGTGATCGA GGTGGCCGGC
GCCTGA
 
Protein sequence
MSTTSITPDE IAQVLLAGER NRTEVAQFSA SHPDLDVRTA YAAQRAFVQA KLDAGEQLVG 
YKLGLTSRNK QRAMGVDCPL YGRVTSSMLA TYGDPIPFDR FIHPRVESEI AFLLKQDVTA
PATVSSVLAA TDVVFGAVDV LDSRYEGFKF TLEDVVADNA SAGAFYLGPV ARPATELRLD
LLGCIVRVDG EVTMTAAGAA VMGHPAAAVA WLANQLALEG ESLKAGQLIF SGGVTAPVPV
VPGGSVTFEF DGLGVIEVAG A