| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_0771 |
|---|
| Symbol | |
|---|
| ID | 8446360 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 850844 |
|---|
| End bp | 851662 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 645039908 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_003200174 |
|---|
| Protein GI | 258651018 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCG CACTGGACCC CGAAGACGGG GCCCGGCCGT TCGCGATCGT CACCGGCGCG
GCCCGCGGCA TCGGGGCGGC CACCGCCGCC CGGCTCGCCC GGGACGGGTT CGACCTGCTG
CTGATCGACC GGGCGGCCGC CGACCTGCAC GCGGCCGTCG AGTACCCGTT GGCCACCGCC
GACGACCTGG AGCGGACCGC GCAGGCCTGC CGGTCGGCCG GCGGCCAGGT GCTCACGGCC
ACCGCCGATG TGCGCCACGA GGACGCGCTG GCCGGCGCCG TCCGGCAGGT GCCGGCCGGT
CGGCTGCGGG CGGTGGTCGC GGTGGCCGGC ATCATCGGCG CGGCCCGCCC GGCCTGGGAG
TACACCCGGG CCGAGCTGGC CCTGGACCTG GACACCAACT TCTACGGCGT GGCCAACCTG
GCCCGGGCGG CGGTGCCGCT GCTGCTGACC GCCCCCAAGG GCACCGGCCG GTTCGTCGCC
GTCGTCTCGG TCGCCGGTCA GGTCGGGCTG CCCCGGCTGG CCGCCTACGT CGCGTCCAAA
CACGCAGCTC TGGGCTACCT CCGCTCCCTG GCCGCCGACC TGGGCGAGTT CGGGGTGACC
GCCAACGCGA TCCTGCCGGG CAGCACCCGG ACCACCCTGC TGGAACGCAG CGCGCAGATC
TACGGACTCA CCGACATCGA GCAGTTCGGC CCGTCCCAAC GACTGGGCCG GCTGATCGAA
CCGGCGGACG TGGCCGCGGC CGTCAGTTGG CTGTGCGGAC CGGACGCCGG CGCGGTCACC
GGGACCGAGC TGCGGGTCGA CGCCGGGTTC GTCGGATGA
|
|---|
| Protein sequence | MTTALDPEDG ARPFAIVTGA ARGIGAATAA RLARDGFDLL LIDRAAADLH AAVEYPLATA
DDLERTAQAC RSAGGQVLTA TADVRHEDAL AGAVRQVPAG RLRAVVAVAG IIGAARPAWE
YTRAELALDL DTNFYGVANL ARAAVPLLLT APKGTGRFVA VVSVAGQVGL PRLAAYVASK
HAALGYLRSL AADLGEFGVT ANAILPGSTR TTLLERSAQI YGLTDIEQFG PSQRLGRLIE
PADVAAAVSW LCGPDAGAVT GTELRVDAGF VG
|
|---|
| |