Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_0688 |
Symbol | |
ID | 8446274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 755961 |
End bp | 757196 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 645039822 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003200091 |
Protein GI | 258650935 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCCAGCG GGGAAGGCGC GGAGGTGACG CTGCGCGACA TCGCGCCCGC CGCGTTCCTG CCGCCCGCGG TGTTCGCCGT CGGCCAGGGC GCGATCGCGC CGGTCATCGT CATCTCGGCG ACCGACCTGG GCGCCAGTCC GGCCATGGCC GCGCTGGTGG TGGCGCTGGC CGGCCTGGGC CAGGTCTGCG CGGACATCCC GGCCGGGTCG CTGGTGCACC GGTTCGGCGA GCGACCGACG ATGATCGGCG CCGCCCTGCT GACCGTGCTC GCCCTCGTCG GCTGCATGGT CGCCGGCCAG CTGATCCTGT TCGCCGCGGC GATCTTCGTC ACCGGTGCGT GCACCGCGGT CTGGCTGCTG GCCCGGCAGG CCTTCGTCAC CGAGGTGGTG CCCTACCGGC TGCGGGCCCG GGCGATGTCC ACCCTCGGCG GGGTGTTCCG GATCGGACTG TTTATCGGCC CGTTCGTCGG CTCGGCCGCG GTGCACGCGG TCGGCCTGTG GGGCGCCTAC GCCGTGCACG TGGTCGCCGC CCTGGTCGCC GCCGGCACCC TGCTGGTCGT GGGTGACCCG AAGGTCGACC CGGCCGGCCC GGGCGGGACG GCCCAGCCCC GCGCGAGGTT CCCGGCCGTC CTGAGCGAAC AGCGGTCGGT GTTCGCCACG CTGGGTGTGG GGGTGCTGCT GGTCAGCGCG ATCCGCGCGG TGCGGCAGGT CGCGTTGCCG CTGTGGGGTC AGGAACTCGG GCTGTCCCCG GCGGCCATCT CGCTGATCTT CGGGGTGTCC GGCGCCATCG ACATGCTGCT GTTCTACCCG GCGGGCAAGG TGATGGACCG GTTCGGGCGG ATGTGGGTGG CCGTTCCGGC GATGACGGTC CTCGGGCTGT CACTGATCGT CCTGCCGCTG ACCGACACCG CCACCGGCCT GATGGTGGTC GGCCTGATCA TGGGTATCGG CAACGGGATG AGCGCCGGCC TGGTGATGAC GCTGGGCGCC GATCTCGCCC CGCCCGGGCA GCGGCCCGTC TTCCTGGGCA TCTGGCGGGT GTTCTCCGAC TCCGGGAACG GAGCCGGACC CTTCGTCATC GCCGGGGTGA CCGCGCTGGC CTCGCTCGGG GCGGGCATCG TCGCGATGGG CATCGTCGGG CTGCTGGGCG GGGGCTGGCT CGGCTACTGG ATCCCGCGCC GGGTGCCGCC ACCCACCCCG CGGGACAAAG TCGTGGCCGA CGGCGGGCCC CGTTGA
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Protein sequence | MPSGEGAEVT LRDIAPAAFL PPAVFAVGQG AIAPVIVISA TDLGASPAMA ALVVALAGLG QVCADIPAGS LVHRFGERPT MIGAALLTVL ALVGCMVAGQ LILFAAAIFV TGACTAVWLL ARQAFVTEVV PYRLRARAMS TLGGVFRIGL FIGPFVGSAA VHAVGLWGAY AVHVVAALVA AGTLLVVGDP KVDPAGPGGT AQPRARFPAV LSEQRSVFAT LGVGVLLVSA IRAVRQVALP LWGQELGLSP AAISLIFGVS GAIDMLLFYP AGKVMDRFGR MWVAVPAMTV LGLSLIVLPL TDTATGLMVV GLIMGIGNGM SAGLVMTLGA DLAPPGQRPV FLGIWRVFSD SGNGAGPFVI AGVTALASLG AGIVAMGIVG LLGGGWLGYW IPRRVPPPTP RDKVVADGGP R
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