Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_0566 |
Symbol | |
ID | 8446150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 625978 |
End bp | 627576 |
Gene Length | 1599 bp |
Protein Length | 532 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 645039699 |
Product | transcriptional regulator, PucR family |
Protein accession | YP_003199970 |
Protein GI | 258650814 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism [T] Signal transduction mechanisms |
COG ID | [COG2508] Regulator of polyketide synthase expression |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCCGA CGGTGCGCGA GGTGCTGACC CTCCCCGTGG TCGCCCCCGG CCGGCCAACG GTGGTCGGCG GTGCCCGCCA TCTGGACAAA CCGGTGCGCT GGGTGCACTC CAGCGACGTC ACCGACCTGA CCGGGCTGCT GCAGGGCGGT GAGCTGGTGC TGAGCACCGG CCTTGCCTTC GTCGGCCGGC CGCAGGCGGT CCCGGACTAC CTGCGCATGC TGGCGCACCT GCGGGTGTCC GCGCTGGTCA TCGAGCTCCT GCACATCGAC GAGCTGCCGC CGGGGTCCGG CGAGCTGGCC GATCGGCTGG CCCTGCCGGT GATCACACTG GCCGGCAGCG TGCCGTTCGT CGAGGTCACC GAGCAGGTGC ACCGGATGAT CGTGGCCGAC CGGTACGACG AGCTGCAGTT CGCCCGGACC ACGCACGAGA CCTTCACCCG GCTCAACATC GGCCGGGCGT CACCGACCGA CATCGTCACC CGGGCCTCGC AGATCCTGGC CGCGCCGCTG GTCCTGGAGG ACCTGAACCG GCACGTGCTC GCCTACTGCA GCGCGGGCCG CCCGGCGGCC CGGCTGCTCG ACGGGTGGAG CCAGCGCTCC CGCCAGCATT CGGCGGCCGG CGAGGGTTGG ACCGCCGTCC CGGTGGGGGT GGGCGCCGAG CAGTGGGGCC GGCTGGTGCT GCCGGCCGAG GCCGCCGACG CCGGCCGGGC CCGGATGGTG CTGGAGCGGG CGACCCAGTC GCTGCAGCTG CAGCGGATGA TCGAGCGCGA CCGCGACGCC CTGCTGGTCC AGGCCTTGGG CGGCCTGCTC GACGACCTGA CCTCGGGCCG GATCACCGAC GAGTCCGAGG CGCTGGCCCG GGCCGGGGCG TTGGGGCTCA CGGTCGGCGC CCGCTACCTG CCGCTGGTGA TCAAGGTGCC CCGGCGGACC GGCGCCGACG CGCTCGCCCA GGGCGCGGTG GACCGCCGAG TGCTGGCCGC GGCCCGCCAG TCGGTCACGG CCGCCGGGTT GTCCGCCATC GGATCGGTGC GGCGGGAAGG GACCGTCGCG CTGGTGATGG GCTGCCCGCA CCCGGCCGCG GCCGACCGGT CCCTGGACGC CGTGTGCGCG GGACTGCAGG AGCGATTGGC CGGGCGCGCC GGGATCGGCG GCTGGGTGGC CGGCACCGCG TCCGCCTCCG CCGGGCTGAT CGACGCGGCC GCCGGACTGG TCGAGGCCGA TCACGTCGCC GAGGTCGGCC TGACCATGGT CGGCGGCGGG ACGGCCGGCC AACGGCTGTT CCGCTCCTCG GACGTGCGGT TGCGCGGGTT GTTCACGCTG TTGCGGGGCG ATCGCCGGGT GCAGGCGTTC GCCGAGACCG AGCTGGGTCG GTTGCTCGAT CACGACGCCC GCACCGGCGA GGACCTGATG GCCGTGCTGC GGGCTTACCT GGGCTGCGGC GGCTCGAAGA CCCGGACCGC GCAGGCCACC GGCCTGAGCC GGCCGACCTT GTACGCCCGG CTGAGCGTGA TCGAACGCAT CCTGGGGGTC TCGCTGGAGC CGGTCGAGTC ACGCACGTCA CTGCACGCCG CGTTGATGAT CATCGACGCC CGGGACTGA
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Protein sequence | MIPTVREVLT LPVVAPGRPT VVGGARHLDK PVRWVHSSDV TDLTGLLQGG ELVLSTGLAF VGRPQAVPDY LRMLAHLRVS ALVIELLHID ELPPGSGELA DRLALPVITL AGSVPFVEVT EQVHRMIVAD RYDELQFART THETFTRLNI GRASPTDIVT RASQILAAPL VLEDLNRHVL AYCSAGRPAA RLLDGWSQRS RQHSAAGEGW TAVPVGVGAE QWGRLVLPAE AADAGRARMV LERATQSLQL QRMIERDRDA LLVQALGGLL DDLTSGRITD ESEALARAGA LGLTVGARYL PLVIKVPRRT GADALAQGAV DRRVLAAARQ SVTAAGLSAI GSVRREGTVA LVMGCPHPAA ADRSLDAVCA GLQERLAGRA GIGGWVAGTA SASAGLIDAA AGLVEADHVA EVGLTMVGGG TAGQRLFRSS DVRLRGLFTL LRGDRRVQAF AETELGRLLD HDARTGEDLM AVLRAYLGCG GSKTRTAQAT GLSRPTLYAR LSVIERILGV SLEPVESRTS LHAALMIIDA RD
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