| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_0560 |
|---|
| Symbol | |
|---|
| ID | 8446144 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 621095 |
|---|
| End bp | 622369 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 645039694 |
|---|
| Product | queuine tRNA-ribosyltransferase |
|---|
| Protein accession | YP_003199965 |
|---|
| Protein GI | 258650809 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
|---|
| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 63 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCACAACG GTTCAGGGTT CGGGTTCGTG GTGGGCAGCC GGCTGCCCGA CCGGCAGGGG
CGGACCGGGG TGATCACCAC CCCACACGGC ACGATCCGCA CGCCGGCCTT CGTCGCCGTC
GGCACCAAGG CGACCGTGAA GTCGTTGCTG CCGGAGTCCG TCGCCCAGCT CGGCGCGCAG
GCGGTGCTGG CCAACGCCTA CCACCTGTAC CTGCAACCCG GTCCCGACAT CGTGGAAGCC
GCCGGGGGTC TGGGCGCCTT CATGCACTGG CCGGGGCCGA CATTCACCGA CTCCGGTGGC
TTCCAGGTGA TGTCGCTGGG GGTCGGGTTC AAGAAGGTGC TGGCCATGAA CACCGCCGGG
CTGCAGTCCG ACGACGTCAT CGCCCCGGGC AAGAACCGGC TGGCCACCGT GGACGAGGAC
GGGGTGACGT TCAAATCGCA CCTGGACGGC TCGCTGCACC GGTTCTCACC GGAGATCTCG
ATGGGCATCC AGCACCAGTT GGGGGCGGAC ATCATCTTCG CCTTCGACGA GTGCACCACC
CTGATGAACA CCCGCGGCTA CCAGGAACGC TCGGTCGTGC GCACCCACGA GTGGGCGGCC
CGCTGCGTCG CCGAGCATCG CCGGCTGACC GACGAACGGG TCGGCCGCCC GTACCAGGCG
CTGTTCGGGG TGGTGCAGGG CGCCCAGTAC GAGGATCTGC GCCGGCAGGC GACCCGGGAC
CTGCTCACCC TCGGGTTCGA CGGCTTCGGC ATCGGTGGCG CGCTGGAGAA GGAGAACCTG
GGCACCATCG TGCGCTGGGT CTGCGAGGAG CTGCCGGAGC ATCTGCCCCG GCACCTGCTG
GGCATCAGTG AACCCGACGA CATGTTCACC GCGATCGAGA ACGGCACGGA CACCTTCGAC
TGCGTCTCGC CGTCCCGGGT CGCCCGCAAC GGCTCGCTGT ACACCGAGCG CGGCCGGATC
AACATCACCA ACGCGCGGTT CAAGCGCGAC TTCGGACCGC TGGACGAGGA CTGCGACTGC
CACACCTGCG CCCACTACAC CCGGGCCTAC GTGCACCACC TGTTCCGGGC CAAGGAGATG
CTGTCGGCCA CCCTGGCCAC CATCCACAAC GAGCGGTTCG TGGTCCGGCT GGTCGATCGG
ATCCGGGACA GCATCGACGA CGGCAGCTTC GACGAGTTCC GGGCCCACTT CCTGGGCCGG
TACTACGCCG CCCGCGGCGG GGCGCCGGCC CCGGTGCTGC TGCCCGGACC GGTTAATGGA
GGCGAGAACC CATGA
|
|---|
| Protein sequence | MHNGSGFGFV VGSRLPDRQG RTGVITTPHG TIRTPAFVAV GTKATVKSLL PESVAQLGAQ
AVLANAYHLY LQPGPDIVEA AGGLGAFMHW PGPTFTDSGG FQVMSLGVGF KKVLAMNTAG
LQSDDVIAPG KNRLATVDED GVTFKSHLDG SLHRFSPEIS MGIQHQLGAD IIFAFDECTT
LMNTRGYQER SVVRTHEWAA RCVAEHRRLT DERVGRPYQA LFGVVQGAQY EDLRRQATRD
LLTLGFDGFG IGGALEKENL GTIVRWVCEE LPEHLPRHLL GISEPDDMFT AIENGTDTFD
CVSPSRVARN GSLYTERGRI NITNARFKRD FGPLDEDCDC HTCAHYTRAY VHHLFRAKEM
LSATLATIHN ERFVVRLVDR IRDSIDDGSF DEFRAHFLGR YYAARGGAPA PVLLPGPVNG
GENP
|
|---|
| |