| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_0452 |
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| Symbol | |
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| ID | 8446033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 487778 |
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| End bp | 489643 |
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| Gene Length | 1866 bp |
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| Protein Length | 621 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 645039587 |
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| Product | Type IV secretory pathway VirD4 protein-like protein |
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| Protein accession | YP_003199861 |
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| Protein GI | 258650705 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGACCT CGAAGACCAA GACCCCGCAC CGCTCCGCCG ACATCGACCG GCTGCTCGTC
GGAGTCGTCC TGCTGGTCGG CGTCGGTGGC CTGCTGCTCT GGGTGGGTGG GCAGGCCGCG
AGCCTGCTCA CCGGCAACGG CTTCGCCGCC GGCCCGGTGA CCGCCGGCGC CCGGGCGCTG
CTCGCGGACC GCGACAACCC TTCTGCGGCC TGGGACTCGC CGATGCCGGA CCCGGCGGCC
TACTGGTGGA TCACCGCCAC CGTCACCGGT CTGCTCCTCG CCCTCGGCGC CCTCGGCGCC
GTCGGGTTCG CCAAGGTTCG CGGACGGGTG CGGTTGCGGG GCCGGCTCTC GGAGATGGCC
ACCCGCCCGG GCATGGCGAC CTCCCGCGAC ATCAAGGCTA CGGTCGGTCC GAAGCGGTTG
CGGCGCAGCG CCCCCGAACT CCGACCCACC CTGGCCGGCC GCATCGGCCC GCGGGAATTG
GGGTGGTGCT GGGGCACCGC CCGCGGCGTC GGGGTGTGGA CCAGCGTCCG CGACTCCGTC
GTCCTCCTCG GCCCATCCGG CGCCGGCAAG GGCGTGTATG TGGTGAACAA CCGCATCCTG
GACGCGCCCG GCGCGGTCGT CGCCACCTCG ACCCGCCCCG ATGTCCTGTC CGTCACCATC
ACCCACCGCC GAAACGCCGG TCCGGTGGCG GTGATCGCGA CCGACGGATC GATGGATGGC
CTGCCGGAGA TCGTGCGCTG GTCCCCGATC CAGGAGTGCC GCGACGGCCG GGTCGCCGCC
GCCCGCGCCC AGGTCCTGGC CGCCGGCTCC TCAAGCGGGG TGGAGGACGC CTCGTTCTGG
CAGGGCTGGA CCGAGAAGGT CATCAAGACC CTGCTGCATG CCGCCGCCTG GTCGGGCACC
GGCATCGACG ACCTGTGGCG GTGGTCCCAG TCCGCGGTCG CGGCGCGCTC CGCCCTGGCG
GTGTTGCAGG ACCTGGACGG CCGCGACACC GGCACCGGGC AGCGGGTCGA GCCGGGGTGG
GCGGACACCC TGGCGCAGGT CGTTGAGGGC GACGACAAGT TCCGCGGCAA CTTGTGGGCC
GGCGTCGGCA AGGCTCTGGC CGGGCTCGAC CTGTATTCGG TGCGGCGTCG GTTCGACCCC
CGACCCGGCG AGAACTTCGA CCCCACCGCG TTCCTCGCCG ACCGGGGCAC CCTGTATCTG
CTGGCCGAGG CCGACGACCC CGCGTCCCGG CTGCTGCAGT GCCTGGTCGC CGACATCACC
CGCACCGCCA AGGACCTGGC CGACCATTCA CCGAAGTCTC GGTTGGATCC GCCGCTGACC
CTGGTGTTGG ACGAGATCGC CAACTGGGCG CCGCTGCCGG CGTTGCCGAC CTACGTGTCG
GCGTACGGCG GGTCCGGGGT GGTGACGATC GCGGTGATCC AGTCGCGGGC GCAGATGGCC
CGCTCGTGGG GCAGCGATGC GGCGAAGGCG ATCTGGGATT CGGCGACCAT CACCGGCATC
CTCGGCGGCG TCACCGACGC GGAGAACCTG CGCGACTTCG CCGCCATCGC CGGCGACCGG
GACGAAACGT CCTGGCAGGC GTCCACCGGC AAAGACGGTG GCCTGCTCGG CCTCGGCTCC
GGCCGGTCCT ACTCCGAGCA GACCCGCACC CGGGCGGTGC TGACCACCGG GGAGATCCGC
GGACTGCCCG AGGGCACGAT GCTGATGTTC TACAAGGGCC TGGACCCGAT GCTCGTCCGG
ATGACCGCCT ACTACCGCCG CAAGGAACGC AAGACGCTGC TGGCCGGCAG GGCCGCGATC
GAAGCCAGGA TCAGCGAAAC CGCCGCCGCC GGGCCGGTGG TCGCGGAACC GGCCGAGGAG
ACCTGA
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| Protein sequence | MLTSKTKTPH RSADIDRLLV GVVLLVGVGG LLLWVGGQAA SLLTGNGFAA GPVTAGARAL
LADRDNPSAA WDSPMPDPAA YWWITATVTG LLLALGALGA VGFAKVRGRV RLRGRLSEMA
TRPGMATSRD IKATVGPKRL RRSAPELRPT LAGRIGPREL GWCWGTARGV GVWTSVRDSV
VLLGPSGAGK GVYVVNNRIL DAPGAVVATS TRPDVLSVTI THRRNAGPVA VIATDGSMDG
LPEIVRWSPI QECRDGRVAA ARAQVLAAGS SSGVEDASFW QGWTEKVIKT LLHAAAWSGT
GIDDLWRWSQ SAVAARSALA VLQDLDGRDT GTGQRVEPGW ADTLAQVVEG DDKFRGNLWA
GVGKALAGLD LYSVRRRFDP RPGENFDPTA FLADRGTLYL LAEADDPASR LLQCLVADIT
RTAKDLADHS PKSRLDPPLT LVLDEIANWA PLPALPTYVS AYGGSGVVTI AVIQSRAQMA
RSWGSDAAKA IWDSATITGI LGGVTDAENL RDFAAIAGDR DETSWQASTG KDGGLLGLGS
GRSYSEQTRT RAVLTTGEIR GLPEGTMLMF YKGLDPMLVR MTAYYRRKER KTLLAGRAAI
EARISETAAA GPVVAEPAEE T
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