Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_0328 |
Symbol | |
ID | 8445909 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 363910 |
End bp | 364611 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 645039473 |
Product | beta-Ig-H3/fasciclin |
Protein accession | YP_003199747 |
Protein GI | 258650591 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2335] Secreted and surface protein containing fasciclin-like repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 76 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGATCA AGCGCGTCCT CACCCTGGTG GCCGGAGCTG GTGTGGCCCT GGCCCTCGCA GCCTGCGGGT CCACCTCCAC CCCCGCCGCG ACGTCGGCGG CCTCCTCGGC GGCTTCCTCC GCGGCGTCCT CGATGAGCAG CTCCATGGCG CCCAGCTCGT CGATGTCCGC GCCGATGAGC AGCTCGATGT CCGGCTCCGA CATGGGCGCC GCCCTGGTCG GGCCCGGCTG TGCCGACTAC GCCAAGCAGG TGCCCACCGG CGCCGGCTCG GTCGACGGGA TGGCCCAGGA TCCGGTGGCC ACGGCCGCCT CGAACAACCC GCTGCTGACC ACGCTGGTGG CCGCGGTGTC CGGCAAGGTG AACCCGCAGG TCGACCTGGT CAACACCCTC AACAGCGGTG AGTTCACCGT GTTCGCTCCG GTCGACTCGG CCTTCGCCAA GATCGACGCC GGCACCATGG ACACCCTCAA GACCAACTCG GAGCTGCTCA GCGGCATCCT GACCTACCAC GTGGTGGCCG GTCAGCTCGA TCCGAGCCAG GTCGTCGGCA GCCATCCGAC CGTCAACGGT GCCTCGCTGA CCGTGACCGG CAGCGGTGAC ACCCTCAAGG TCAACGACGC GAACGTCATC TGCGGCGGCG TCAAGACCAA GAACGCCACC GTCTACCTGA TCGACTCCGT GCTGATGCCC CCGACCAGCT GA
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Protein sequence | MLIKRVLTLV AGAGVALALA ACGSTSTPAA TSAASSAASS AASSMSSSMA PSSSMSAPMS SSMSGSDMGA ALVGPGCADY AKQVPTGAGS VDGMAQDPVA TAASNNPLLT TLVAAVSGKV NPQVDLVNTL NSGEFTVFAP VDSAFAKIDA GTMDTLKTNS ELLSGILTYH VVAGQLDPSQ VVGSHPTVNG ASLTVTGSGD TLKVNDANVI CGGVKTKNAT VYLIDSVLMP PTS
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