Gene Namu_0328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0328 
Symbol 
ID8445909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp363910 
End bp364611 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content69% 
IMG OID645039473 
Productbeta-Ig-H3/fasciclin 
Protein accessionYP_003199747 
Protein GI258650591 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2335] Secreted and surface protein containing fasciclin-like repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones76 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGATCA AGCGCGTCCT CACCCTGGTG GCCGGAGCTG GTGTGGCCCT GGCCCTCGCA 
GCCTGCGGGT CCACCTCCAC CCCCGCCGCG ACGTCGGCGG CCTCCTCGGC GGCTTCCTCC
GCGGCGTCCT CGATGAGCAG CTCCATGGCG CCCAGCTCGT CGATGTCCGC GCCGATGAGC
AGCTCGATGT CCGGCTCCGA CATGGGCGCC GCCCTGGTCG GGCCCGGCTG TGCCGACTAC
GCCAAGCAGG TGCCCACCGG CGCCGGCTCG GTCGACGGGA TGGCCCAGGA TCCGGTGGCC
ACGGCCGCCT CGAACAACCC GCTGCTGACC ACGCTGGTGG CCGCGGTGTC CGGCAAGGTG
AACCCGCAGG TCGACCTGGT CAACACCCTC AACAGCGGTG AGTTCACCGT GTTCGCTCCG
GTCGACTCGG CCTTCGCCAA GATCGACGCC GGCACCATGG ACACCCTCAA GACCAACTCG
GAGCTGCTCA GCGGCATCCT GACCTACCAC GTGGTGGCCG GTCAGCTCGA TCCGAGCCAG
GTCGTCGGCA GCCATCCGAC CGTCAACGGT GCCTCGCTGA CCGTGACCGG CAGCGGTGAC
ACCCTCAAGG TCAACGACGC GAACGTCATC TGCGGCGGCG TCAAGACCAA GAACGCCACC
GTCTACCTGA TCGACTCCGT GCTGATGCCC CCGACCAGCT GA
 
Protein sequence
MLIKRVLTLV AGAGVALALA ACGSTSTPAA TSAASSAASS AASSMSSSMA PSSSMSAPMS 
SSMSGSDMGA ALVGPGCADY AKQVPTGAGS VDGMAQDPVA TAASNNPLLT TLVAAVSGKV
NPQVDLVNTL NSGEFTVFAP VDSAFAKIDA GTMDTLKTNS ELLSGILTYH VVAGQLDPSQ
VVGSHPTVNG ASLTVTGSGD TLKVNDANVI CGGVKTKNAT VYLIDSVLMP PTS