Gene Namu_0315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0315 
Symbol 
ID8445896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp350755 
End bp351744 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content74% 
IMG OID645039460 
Productputative dehydrogenase 
Protein accessionYP_003199734 
Protein GI258650578 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGGCC CGACCGAGCC CGGCGCCGCC TTCTGGGTGC GTGCCCCGGG CGTCGGCGAG 
ATCCGGCCCG GCCCCCGGCC CGAGCCCGAA GCGGGCCAGG TCCGGGTCCG CACCCTGCGC
AGCGGGATCA GCCGGGGAAC CGAGACGTTG GTGTTCACCG GGTCGGTACC GCCGAGCCAG
TACCAGGCGA TGCGGGCACC GTTCCAGGAA GGGGATTTCC CCGGACCGGT CAAGTACGGC
TACCTCAACG TGGGGGTCGT CGAGTCCGGC CCGGCCGACC TGCGTGGGCG GACGGTGTTC
TGCCTGTACC CGCATCAACG CGAGTACGTG GTCCCGGCGT CGGCGGTGAC CCCGGTGCCC
GACGGGGTGC CACCGGCCCG GGCCGTGCTG GCCGGCACGG TGGAGACCGC GGTCAACGCC
TGCTGGGATG CGCGGCCGCT GGTCGGCGAC CGGATCACCG TGGTCGGTGC CGGCATGGTC
GGTGGCAGCC TGGCCCGGGT GCTGGCCGGG CTGCCGGGTG CGCGCGTCAC CCTGGTCGAC
CTGAACCCGG CTCGGGCCGA GCTGGCGGCC GCCCTCGGTG TCGACTTCGC CGCCCCGGAG
CGGGCGCCCG ACGGCCAGGA CCTGGTCTTT CACACCAGCG CCAGCTCTGA CGGGCTGGCC
CTGGCGCTGC GCCTGCTGCG TCCGGAGGGG GAGGTGATCG ACCTGTCCTG GTACGGCACC
ACCCCGGTCC GGCTGCCGCT CGGCGAGGCC TTCCACTCCG GCCGGCTCAG CATCCGGGCC
AGTCAGGTGG GCGCGGTCGC CCCGGCCCGC CGCGGTCACC GGAGCATGGG CGAGCGCCTG
GCCCTGGCCC TGGAGCTGCT CCGGGACCAG GCGTTCGACG CGTTGCTGTC CGGGGAATCG
ACATTCGAGG ATCTGCCGCG GGTGCTGCCC GCGTTGGTCG GCGGCCAGCT GCCGGCGCTT
TGTCACGTCA TCACCTACGA CGAGAGGTAG
 
Protein sequence
MVGPTEPGAA FWVRAPGVGE IRPGPRPEPE AGQVRVRTLR SGISRGTETL VFTGSVPPSQ 
YQAMRAPFQE GDFPGPVKYG YLNVGVVESG PADLRGRTVF CLYPHQREYV VPASAVTPVP
DGVPPARAVL AGTVETAVNA CWDARPLVGD RITVVGAGMV GGSLARVLAG LPGARVTLVD
LNPARAELAA ALGVDFAAPE RAPDGQDLVF HTSASSDGLA LALRLLRPEG EVIDLSWYGT
TPVRLPLGEA FHSGRLSIRA SQVGAVAPAR RGHRSMGERL ALALELLRDQ AFDALLSGES
TFEDLPRVLP ALVGGQLPAL CHVITYDER