| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2492 |
|---|
| Symbol | |
|---|
| ID | 8420354 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 2856685 |
|---|
| End bp | 2857416 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 645039095 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003199352 |
|---|
| Protein GI | 258406610 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGAGG TCCATTCCAT CGATAAATTT TTTTATATCC CTGAAGAGGT CCAGGCCTTA
TCTCAGGTTT CTTGCACTGT GGCCGCCGGA GAGGTGGTCG TGGTCATCGG CCCCTCCGGA
TCCGGGAAAT CGACGTTTTT GCGCTGTCTG AACCGTTTGG AATACGCTGA TACCGGATCG
ATCCGCATCG ACGGCAAGGA TATCCTCGCA CCGAAATGCG ATATCAACCG CATTCGGGCC
GAGGTGGGCA TGGTTTTCCA GCATTTTCAT CTCTTTCCGC ACAAGACGGT TTTGGAAAAT
CTGACCATGG CTCAGATGAC CGTTCGCAAA CGGCCCAAAA AAGAGGCCGA GCAGGTGGGG
ATGGCTTTGT TGGACAAGGT CGGGATTCAA GCCAAGCACA GTTCCCACCC GGAACAATTG
TCCGGCGGTC AGCAGCAGCG CGTGGCCATC GCACGCTCCC TGGCCATGAA TCCCAAGGCT
ATGCTCTTTG ACGAACCCAC GTCGGCCCTG GATCCGGAGA TGATCGGTGA GGTGCTTGAT
GTCATGAAAA CCCTTGCCAA AGAGGGTATG ACTATGGTCG TCGTGACCCA TGAAATGGGG
TTTGCCCGGG AAGTGGCCGA TCGGGTCTTG TTCATGGACG AGGGCCGGAT CGTGGAAGAG
GGGACGCCGG AACATTTTTT CCAGAATCCC CAGCACCCGA GGACGAAATT GTTTTTGAGC
CAAATCCTTT AG
|
|---|
| Protein sequence | MIEVHSIDKF FYIPEEVQAL SQVSCTVAAG EVVVVIGPSG SGKSTFLRCL NRLEYADTGS
IRIDGKDILA PKCDINRIRA EVGMVFQHFH LFPHKTVLEN LTMAQMTVRK RPKKEAEQVG
MALLDKVGIQ AKHSSHPEQL SGGQQQRVAI ARSLAMNPKA MLFDEPTSAL DPEMIGEVLD
VMKTLAKEGM TMVVVTHEMG FAREVADRVL FMDEGRIVEE GTPEHFFQNP QHPRTKLFLS
QIL
|
|---|
| |