| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2481 |
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| Symbol | |
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| ID | 8420343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2845926 |
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| End bp | 2847788 |
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| Gene Length | 1863 bp |
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| Protein Length | 620 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645039084 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_003199341 |
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| Protein GI | 258406599 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0503355 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAAC AGCACGCCCC GGAAGAACAT CTTTTTCGCC CCGCGGCTCC CGTGCGCATG
GGAGCGAATC TCTCGGCCCA GGAGATCGAG CAGGCCAGGG CCTGGTTCGC CGACAACCCG
GAGGGGTTCT GGGAACAGGC GGCCAAGGAA TTGCAATGGA ACGAGCCGTG GCACACGGTG
TGCGACGACG GGGACCCGCC GACCTGGTTT GCCGGTGCCA AGTGCAATAT CGTCCACAAT
TGTCTCGACC GCCACGTCCA CTCCGCCAAC CGCAATAAAT TGGCCCTTGT GTGGGAAAGT
GAAGCCGGGG AAACCCGGAA ATGGACCTAT TTTGAATTGT CCCGAGAGGT GAACCGCCTC
GCAGCGGGCT TGCGCCGGCT GGGGTTCCAA GCAGGATCGG TTTTCGTCCT TTGCCTCCCC
CCGTTGCCGG AAACCGTGGC CCTGAGTCTG GCCATCGCGA AAATCGGGGC CGTACAGAGT
CATGTCTTTG TCGGGTATGC GGCCAAGGTC TTGCGGGCCA GGATCGCCGC CCTGCAGGCC
GAATGCGTCG TCTGTGCCGA CGGTTTCGCC CGCAATGGAA GTGTTGTGGG CCTCAAAGAG
ATCGTGGACA CCGCCTTGGA CAGCCCGGAA GGCGACAGCG TCGAACTGAC CATCGTCGTC
CCGCGCCTGG GCATCAAACA AAGCCTGCGC ACTGACCGCG ACCTCGCCTA CGATGATGTC
CTCCATCCGG TCCACGGGAA CGAGCCCACC ACCGCTCTGG ACAGCGACCA CATCCTCTTC
GTCCAGTACA CCTCCGGGAC GACCGGGACG CCCAAAGGGG TGGTCCATAC CCACGGCGGA
TACATGGTCG CCTTGAATCG GACCATGAAC TGGGTTCTGG ATATCAAGGC CACGGACATC
CTCTGGTGTC AGGCGGATCT GGGCTGGATC ACCGGGCAGA GCTACGCCCT GTGGGGACCG
TTATTGGCGG GCTCGACCAC AATGCTCTAC GAGGGACACC CTCTGTACCC CAAAGCCGAC
AGGATCTGGC GGATTGTCGA AAAGGCCGGT GTAAGTATCC TCTACACCAC GCCGACGCTG
ATGCGCATGG TCAAACGCTA CGGGCCGGGC TTCCCCGCCC AGCATGATCT GAGCGCACTC
CGCCTCTTGG CCGCGGTGGG CGAACCCCTG GCGCCGGAGG TCTGGCTCTG GTGGCATGAA
CACATCGGTC AGGGGCAATG CCCCCTGCTC AACACCTGGT GGCAGACCGA AACCGGCGCC
ATCGTCATTT CCCCCTTGCC CGCCAATACC CTCAAACCCG GCTCTGTAGG ACGCCCCCTG
CCGGGCATCC AGGCGGCCGT AGTCGATCCC GAAGGGACCC CTGTGCCGGC CAACACCACG
GGGCATCTCG TGCTCTACGG GTCGTGGCCC GGCTTCTTCA ACGGCTTATT CCGCGAACAC
GACCAGAGCT TTGCCGGCTA TTGGAGTCCC TCGCAAAAAA CCTATTGGAC AGGTGATCTG
GCGCGGCAGG ATGCGGACGG CCATCTCTGG ATACTCGGCC GCCAAGACGA GGTCCTGAAT
ATCGCCGGAC ACATTCTGGG AGCCACTGAA ATTGAAAACG GTCTGCTCGT CCATCCGGGC
GTCCACGAAG TCGCCGTGGT CCCTGTACCT GATAAGATCC GCGGTCAGGC GGCCAAGGCC
TATGTGGTCC TCAAGGAGCC CCATCAGGCA GGAGACGCCT TGAAAACGGC CTTGACCGAA
CTGGTGCGCC AGGAACTCGG TCCCGTGGTC CGAATCAAGG ACATCGTCTT TGTCGAGACG
CTTCCCAAAA CCGGGTCCGG GAAAATCCTG CGCCGTGCCC TGCGTGACAG CCCACCAGCC
TGA
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| Protein sequence | MSEQHAPEEH LFRPAAPVRM GANLSAQEIE QARAWFADNP EGFWEQAAKE LQWNEPWHTV
CDDGDPPTWF AGAKCNIVHN CLDRHVHSAN RNKLALVWES EAGETRKWTY FELSREVNRL
AAGLRRLGFQ AGSVFVLCLP PLPETVALSL AIAKIGAVQS HVFVGYAAKV LRARIAALQA
ECVVCADGFA RNGSVVGLKE IVDTALDSPE GDSVELTIVV PRLGIKQSLR TDRDLAYDDV
LHPVHGNEPT TALDSDHILF VQYTSGTTGT PKGVVHTHGG YMVALNRTMN WVLDIKATDI
LWCQADLGWI TGQSYALWGP LLAGSTTMLY EGHPLYPKAD RIWRIVEKAG VSILYTTPTL
MRMVKRYGPG FPAQHDLSAL RLLAAVGEPL APEVWLWWHE HIGQGQCPLL NTWWQTETGA
IVISPLPANT LKPGSVGRPL PGIQAAVVDP EGTPVPANTT GHLVLYGSWP GFFNGLFREH
DQSFAGYWSP SQKTYWTGDL ARQDADGHLW ILGRQDEVLN IAGHILGATE IENGLLVHPG
VHEVAVVPVP DKIRGQAAKA YVVLKEPHQA GDALKTALTE LVRQELGPVV RIKDIVFVET
LPKTGSGKIL RRALRDSPPA
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