Gene Dret_2476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2476 
Symbol 
ID8420338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2840324 
End bp2840677 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content53% 
IMG OID645039079 
ProductGlpM protein 
Protein accessionYP_003199336 
Protein GI258406594 
COG category[R] General function prediction only 
COG ID[COG3136] Uncharacterized membrane protein required for alginate biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00502599 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGATGC AAGAAATTCT TTTACGTTTT ATCGCCGGCG GAACAGCAGT CGTGCTGATT 
TCCGCCCTGG GTCGTCTGAA ATACGAACTG ATATCAGGCC TGTTCGTGCT TTTTCCGGCA
GTGACCCTGG TCAGCTTTTA TTTTCTCGGT CAAAGCGCTG GGAGCGAAAC AGTGGGCAAG
GTTGCTTTGT TCAGCATTTA CGCTGTGCCG ACCCCTATCG CCTTTCTGCT CGCCTTTTAT
TTTCTCCAGC AGCGTCTGCC CGTGACCTGG GCGCTTTTCT GGGGCGTCCT GGCCTGGCTG
GTGGCCGCTC TTGTCCTGGT CGTTTTGAAC ACCAAGTTCT TCCATATCAC TTGA
 
Protein sequence
MSMQEILLRF IAGGTAVVLI SALGRLKYEL ISGLFVLFPA VTLVSFYFLG QSAGSETVGK 
VALFSIYAVP TPIAFLLAFY FLQQRLPVTW ALFWGVLAWL VAALVLVVLN TKFFHIT