Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_2476 |
Symbol | |
ID | 8420338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 2840324 |
End bp | 2840677 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 645039079 |
Product | GlpM protein |
Protein accession | YP_003199336 |
Protein GI | 258406594 |
COG category | [R] General function prediction only |
COG ID | [COG3136] Uncharacterized membrane protein required for alginate biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00502599 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCGATGC AAGAAATTCT TTTACGTTTT ATCGCCGGCG GAACAGCAGT CGTGCTGATT TCCGCCCTGG GTCGTCTGAA ATACGAACTG ATATCAGGCC TGTTCGTGCT TTTTCCGGCA GTGACCCTGG TCAGCTTTTA TTTTCTCGGT CAAAGCGCTG GGAGCGAAAC AGTGGGCAAG GTTGCTTTGT TCAGCATTTA CGCTGTGCCG ACCCCTATCG CCTTTCTGCT CGCCTTTTAT TTTCTCCAGC AGCGTCTGCC CGTGACCTGG GCGCTTTTCT GGGGCGTCCT GGCCTGGCTG GTGGCCGCTC TTGTCCTGGT CGTTTTGAAC ACCAAGTTCT TCCATATCAC TTGA
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Protein sequence | MSMQEILLRF IAGGTAVVLI SALGRLKYEL ISGLFVLFPA VTLVSFYFLG QSAGSETVGK VALFSIYAVP TPIAFLLAFY FLQQRLPVTW ALFWGVLAWL VAALVLVVLN TKFFHIT
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