| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2448 |
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| Symbol | |
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| ID | 8420308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2806488 |
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| End bp | 2807957 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 645039049 |
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| Product | sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_003199308 |
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| Protein GI | 258406566 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATAGAA TTGACATTCG CTGTGAATGC AATTTAGCTG CTCAAGCATT CTCGCCACCC
CATTGCGATG ATTGTGAAAG CCGTTACCCG GTGAAGATAA TCGATATAAG CTTGGGAGGG
GCCAAACTAG TATTCAACAC CCTCCCATTC AATAATGACT ATTTTACTCT CAAGCTTGAA
GACTTTCCAA ATATTGAAAT TGTGGCTTAT GTAAAATTTA AAAAAGAAAA TCAGGCTATA
GTTGTTTTTT ATTACGACTC AGTCGAAAAT GCGCAAAAAA TAATTGAGAT AGTACGAAAA
CACTACGAAC ACAAAAACCA CAATTACTGT CCCTATTGCG GCCAAACCCA CGCCAGTGGA
AGTCTTTTCT GCCCTCATAC CCAGTTAAGC TTGAACATTT ACGACCCCGC CTACCTCAAT
GACCACGTCT GTCGAACGCT CCTCAAACGC ATCAGTTGGC GATTGCACAA TGTTGATTGC
GACAAAGCCT GGTCTATTCT CTCTTCCCTC GACAAACAAT TACTCAGTGT GCAGCCCACA
ACCGCACAAT TGGAGATCGT AGGGACCTCT CCAGCCATGT TGAATCTCTT TTCACAAATC
CGCAAAGTCG CCGCCACCGA CCTCCCCGTT CTCATTCTTG GCGAAAGCGG AACCGGTAAA
GAGCTCGCTA GCAAAGCTAT ATTCGAACGA AGTGACCGCA AATCGAAACC ATTTATCGTC
ATCAACTGTG CAGCCATTCC CGAAACTTTG CTCGAGGCTG AACTTTTTGG GTACGAACGC
GGCGCGTTCA CTGGCGCGCA CACGACCCGC CACGGCAAAT TTGAGCACGC TGACGAAGGC
ACAATCCTTT TGGATGAAGT CGGAGACCTC CCCCAATCCC TTCAAGCGAA GCTCCTGCGC
TTTCTTGAAG AAGGGACCAT TGAACGCCTC GGCTCCAATA CCCCCCGACA ACTTGATATC
CGCATCCTGG CAGCCACCAA CCAGGACCTT GAAAGCAAAG TCCACAACGG CACCTTCCGA
CTTGACCTCT ACCACCGGTT GAGCGCCTTC ACCATTACCC TTCCCGCCCT GCGGGACCGC
GGCGCCGACA AGACCATCCT CGCCAAATTT TTCCTCAACA AATTCAGTCA AAAATACAAT
TCCGGTCGCC CCATGGTCTT TTCCAGCACG GCGATTGGGG CCATCAACGA CTATGCCTGG
CCCGGCAATA TCCGTGAAAT GATCAATAAA ATCCGCAAGG CAGTCGTCAT AGCCGACTCG
CATACTATTA GCACGGAAGA TCTGGGGCTC CATACATCCC AACCCACGTC ATTGGGCGCC
CAAAATGAGG GACGGAAAAA GAAAATTGAC AAAGCGACCC TCCTTGAAAC GCTGGATGCA
TGCAGTTGGA ACAAAAGCCT GGCTGCCAAA AGGTTATGCA TAAGCAGACC GACATTGTAC
AAACTGACAC GGGAGTACGG ACTTCTATGA
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| Protein sequence | MHRIDIRCEC NLAAQAFSPP HCDDCESRYP VKIIDISLGG AKLVFNTLPF NNDYFTLKLE
DFPNIEIVAY VKFKKENQAI VVFYYDSVEN AQKIIEIVRK HYEHKNHNYC PYCGQTHASG
SLFCPHTQLS LNIYDPAYLN DHVCRTLLKR ISWRLHNVDC DKAWSILSSL DKQLLSVQPT
TAQLEIVGTS PAMLNLFSQI RKVAATDLPV LILGESGTGK ELASKAIFER SDRKSKPFIV
INCAAIPETL LEAELFGYER GAFTGAHTTR HGKFEHADEG TILLDEVGDL PQSLQAKLLR
FLEEGTIERL GSNTPRQLDI RILAATNQDL ESKVHNGTFR LDLYHRLSAF TITLPALRDR
GADKTILAKF FLNKFSQKYN SGRPMVFSST AIGAINDYAW PGNIREMINK IRKAVVIADS
HTISTEDLGL HTSQPTSLGA QNEGRKKKID KATLLETLDA CSWNKSLAAK RLCISRPTLY
KLTREYGLL
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