Gene Dret_2435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2435 
Symbol 
ID8420295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2789319 
End bp2789825 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content56% 
IMG OID645039036 
ProductCBS domain containing membrane protein 
Protein accessionYP_003199295 
Protein GI258406553 
COG category[T] Signal transduction mechanisms 
COG ID[COG3448] CBS-domain-containing membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.118625 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGA TTACGGAATT CATGCGCACT GATGTGCACA GCGTGCACGA GAACACGAGT 
TTTGAGACCC TGATGTGCCA GGATATCTGT AACATTGCCG ACCATGTCTA TGTCCTGGAT
AGGGACAACC ATCCAGTGGG GTTGATTACC ACCCTGGAGT TGCTCAAGGC TTTGGTGCCG
CCGTATCTCA ATAGCCATTT GGCGCAGATG CTCCCGGAAG ACCAGCGCTT AAACGAGAAG
TGCTACGAAC ATGCCCGCCA TTTGACGGCC AGGGATGTCA TGTCCACCGA TCTGCCCCTG
ATCAGTATCC ACGACAGTTT TCTGCGCGCC AGCACCATGG TTCTGGACAC GGCAGCCAAT
GCCCTGCCCG TGGTCGACGA ACATGGGCGT CTGCTGGGAG AAATGACCCG CTGTGATCTG
GTGCGCTATC TGGGGAGCAA TTTCTGTCCG CTGCCCGATC TGCGCGGTAC GGAAGGCGAA
CAGGACGGCC AGGCTCGCGT CCATTGA
 
Protein sequence
MTKITEFMRT DVHSVHENTS FETLMCQDIC NIADHVYVLD RDNHPVGLIT TLELLKALVP 
PYLNSHLAQM LPEDQRLNEK CYEHARHLTA RDVMSTDLPL ISIHDSFLRA STMVLDTAAN
ALPVVDEHGR LLGEMTRCDL VRYLGSNFCP LPDLRGTEGE QDGQARVH