| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2412 |
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| Symbol | |
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| ID | 8420272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2763438 |
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| End bp | 2764406 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645039013 |
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| Product | Dimethylallyltranstransferase |
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| Protein accession | YP_003199272 |
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| Protein GI | 258406530 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00033108 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAGCAT TACACACCTA TTTCGGTCTT CATCGACCGG CCATAGAAGA CCATATTCAA
TCGGTTCTCG GGGAGCTTGA TCCCCTTATC GTCCCGGTGG CCAGCCATGT GCTGGGGGCT
GGGGGCAAAC GGTTGCGGCC CATTTTATGC GTTTTGACCG CTGAAGCCTT CGGGTATCGG
GATAAGGAGG TCTACCCCCT GGCCACGGCC CTGGAATTGC TCCACTCAGC GACCCTGATC
CACGACGATA TCCTTGACGG GGCGGCGCTG CGCCGGGGGC AACCCTCGGC CCATCTCGCT
TTCGGGGTCC AGGAAACTGT TCTTGCCGGC GACGCCCTGT TGGCCATGGC CAATAAATGC
ATCGCCGGAT ACGGGCAGCC GGAATTGATG CGTATCGCCT CCGAGGCGAT CATGGCCACC
GCAAACGGGG AGATCATGGA AATCGCTCAA CTCCGGGAGC CCAGGCTGTC TGAAGAGGAT
TATTTTCAGA TCATTACCGG CAAAACCGCT GTCCTCATCC AGGCCTCCTG TGAATGCGGC
GCGGTGCTGG CCGGGGCTAA GGGCCCGCAG CGCCAGGCGG CTCAGGACCT TGGTCGGAAT
CTGGGCATCG CCTTTCAACT TGTCGACGAC GCCCTGGATT ACACCAGTGC TGTAGAAGAT
TCCGGCAAGC CCATCGGGGG CGATCTGCGG GAAGGAAAGC TGACCCTGCC GCTTCTTTTC
TACCTCAAGA GTCTGCCCCA AGAGGAGGCG GAACGGGTGT TGGCGGCTAT CAAGCACGGG
ACCCTGGACG AAGTCGAACA ATCGGCCATT ATTACGGCTA TCGGCCAGGC CCACCTGGCG
GAAGCGACCC GGGAGGTCGC GGCCGGGTAT CTCGAGCAGG CCCGAAAGGC TTTGCAGTTT
TTCCCCGCAG GCCCGTGCCA AACGTTGTTG GGAAGTATCC TGGAATATGT CCAGTACCGC
AATACATAG
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| Protein sequence | MEALHTYFGL HRPAIEDHIQ SVLGELDPLI VPVASHVLGA GGKRLRPILC VLTAEAFGYR
DKEVYPLATA LELLHSATLI HDDILDGAAL RRGQPSAHLA FGVQETVLAG DALLAMANKC
IAGYGQPELM RIASEAIMAT ANGEIMEIAQ LREPRLSEED YFQIITGKTA VLIQASCECG
AVLAGAKGPQ RQAAQDLGRN LGIAFQLVDD ALDYTSAVED SGKPIGGDLR EGKLTLPLLF
YLKSLPQEEA ERVLAAIKHG TLDEVEQSAI ITAIGQAHLA EATREVAAGY LEQARKALQF
FPAGPCQTLL GSILEYVQYR NT
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