| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2360 |
|---|
| Symbol | |
|---|
| ID | 8420220 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | - |
|---|
| Start bp | 2693201 |
|---|
| End bp | 2694052 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 645038962 |
|---|
| Product | split soret cytochrome c precursor |
|---|
| Protein accession | YP_003199221 |
|---|
| Protein GI | 258406479 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCAGG ACCAAAGCAG TGTTTCGCGC AGGAATTTTC TCACAGGTAC GGGAGCGGCC
CTGGCCGGGA CCGCGGCCGG TCTTGTCGGC CACAGTCTGT TTTTTCGCCC CTCCTCGGCT
GGCGCAGTCA AACAGGGATT TGAATGGCCT TGGCCCTATA CCGAATTGGA TCCGGAGAAA
GTGCGCAAGA AAGGGCACGC CGGTTACTAT GACGGAGACT GTGCCGAGGG AGCGCTGTAT
GCTCTTGTTT CGGAACTGCA AGAGAATGTG GGCGCCCCTT ACACCTACCT GCCGGTCCAG
ATTATGGGGT TTGGCGGGGG TGGCGTGGCT GGCTGGTGCA CCTTGTGCGG CGCTCTGAAC
GGAGCTTGTG CAGCCATCTC CCTGACCTCG AAGGATTTTT ACAAACTCTC CAGTGAGTTG
GTGGCCTGGT ATTGTGAAAC TCCTTTCCCA AGCCATACAA GTAATGAATT GGCCAAAAAC
GGAGAGTTTC TGGTCAACAA ATCGAACAAG GTCTTCAAAC AGACAGTGTC CAACTCTCCT
TTGTGCCATG TCAGTGTGTG TAAATGGTGC AAGGAAAACG AATGCGGCTC CGGGTGCCCG
GATCGGAGTG AACGCTGCGC CAGGATGGTC GGGGATGTCG TGGCTAAGAC GGCTGAGATA
TTAAATGCGT ATCATTTCGG TGAGTTCAGG GCTCAATGCT CGGAGTCCGA TCTTGCCCAC
TCCTGTCAGG CCTGTCACAG CAAGGAAAGT CCATACGAAA TGGGTGGCTG GAGTCGGGGC
AAAATGGACT GCACAAGTTG CCATATAAAA GGCCATGCTT CTCTGGTCGA TCCGCATCAC
CCAGGCAAGT GA
|
|---|
| Protein sequence | MSQDQSSVSR RNFLTGTGAA LAGTAAGLVG HSLFFRPSSA GAVKQGFEWP WPYTELDPEK
VRKKGHAGYY DGDCAEGALY ALVSELQENV GAPYTYLPVQ IMGFGGGGVA GWCTLCGALN
GACAAISLTS KDFYKLSSEL VAWYCETPFP SHTSNELAKN GEFLVNKSNK VFKQTVSNSP
LCHVSVCKWC KENECGSGCP DRSERCARMV GDVVAKTAEI LNAYHFGEFR AQCSESDLAH
SCQACHSKES PYEMGGWSRG KMDCTSCHIK GHASLVDPHH PGK
|
|---|
| |