Gene Dret_2295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2295 
Symbol 
ID8420153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2607848 
End bp2608630 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content65% 
IMG OID645038896 
ProductABC transporter related 
Protein accessionYP_003199157 
Protein GI258406415 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCATGC ATCCGCCTGA GCATATCGCC GTGTCCGAAC TGGCCGCTCG CTATGTTGCG 
GACGGGAGCA CGGTCTTCTC CGAGATGACC TTTGCCCTGC CCCCGGGACA ATGCCTCGCC
CTGATTGGGC CCAGCGGCTG CGGCAAATCG ACTCTGCTCC ACGTGCTGGC CGGGCTTTTG
CCCACGCACG AGGGAAGTGT GACCTACGGC CAAAAGCCGG TCTCCGACCT GCGGGGCCGT
GTCAGCTACA TGCAGCAAAA AGATCTGCTT CTGCCCTGGC GCACTGTTGA GGACAACGCC
GCTCTGGGGC TACTCATGCA GGGCCATCCC AAAAAGGCCG CCCGACAAAC CGTCCGCGAC
CATCTCCCCG GGTTCGGGCT CGCCGAGGCC GCCGGAAGCT ATCCGCACCA CCTCTCCGGA
GGCATGCGCC AGCGCGCGGC GCTGCTGCGC ACCCTGCTGT GCAGCAAGCC GGTCATCCTT
TTGGACGAGC CCTTCGGCGC GCTGGACGCC ATCACCCGCC GGGCCATGCA CGACCAACTT
CTGCAAGTCT GGCGCGCCTT GGGGGCCTCA ATCATCCTCG TGACCCACGA CGTGGACGAA
GCCTTGATCC TGGCTGACAC CGTGCTGGTC CTCACCCCCT GCCCAGCCCA GGTCCAGACC
AGTCTTGCCG TCGATTTGCC CCGCCCGCGC CAAGTCACGG ACCCGGCCTT TGTGGAGCAC
AAAGCATTCC TGCTGGAGCA GTTGGACACC TGGAGCTCTC CTACATGCGC CGCCGTTTCC
TGA
 
Protein sequence
MPMHPPEHIA VSELAARYVA DGSTVFSEMT FALPPGQCLA LIGPSGCGKS TLLHVLAGLL 
PTHEGSVTYG QKPVSDLRGR VSYMQQKDLL LPWRTVEDNA ALGLLMQGHP KKAARQTVRD
HLPGFGLAEA AGSYPHHLSG GMRQRAALLR TLLCSKPVIL LDEPFGALDA ITRRAMHDQL
LQVWRALGAS IILVTHDVDE ALILADTVLV LTPCPAQVQT SLAVDLPRPR QVTDPAFVEH
KAFLLEQLDT WSSPTCAAVS