| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2285 |
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| Symbol | |
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| ID | 8420143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2595828 |
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| End bp | 2597897 |
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| Gene Length | 2070 bp |
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| Protein Length | 689 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 645038886 |
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| Product | ribonuclease II |
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| Protein accession | YP_003199147 |
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| Protein GI | 258406405 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACATG AGACTCAGCA GATCACCTCG GGGACGGTTG TTGAATTCAT GCAGAGCAAC
CAGCCGATTG TGGCCTGGGT GGTCGACGCC CAACCCAATC GACTGCGTGT GGTAACGATC
AATAAACGGG AAAGCAAACT CCCTGCGGCC CGGGTGCTGC CCTGGTCCGG GCCGAGCTAC
ACCGCCGCAG CCTCCCGGGA GGAATTCCTG GAGCGCCTGG AGCAGCACCA GCAGCGCCGG
GTGCAATTGG CCGCAGAACT GGAGCCCGAG TCCCTGTGGG ACTTGGTACG CGACGATGTC
CAGCGTGGCA CGGCCCGGTG GTTTGCTGAA CTCATCTGGG CCGACCCTGA CGCCGACCAG
ATCGCGGCCA TGGGCCGGGC GCTTTTGGAA AGCAAAGCCC ACTTCAAGTT CGTCACTCCC
AATTTTGAGA TTTATTCCGA GGAAAAGGTC CAGCTTCGCC TGGCAGAGAT GGAAGCGGCC
CGGCGGCGAC AGGAACTGAT CGACCACGGC CACGGTTTTT TAAAGGCGCT CTGGGCCAAG
CGCCGGGGCG AGGAAACGGT CCTGCCGGAA TTGTCGGCGG AATTGGTCGA CCAGTTGCGC
CAGCTTCTTC AGCGGCGCAT GGCCGATCCT GAAGATGGGG AAACCGCCAA TGTCTGGCGG
GAACTGCGCA AAGGACTGCC CGACGACCCC CATTTGCCCT TGCGTCTGGC CCAGGCCTGG
GGACTTGTTC CCGAGCACTA TAACGTCCTT CTGGACCGGG CCGGGTACAG TTGGGGCGAC
GGTTGGTCCC AGGCCTATAC GCAGGAAATT GAACGTCTGG AAAACGTTGT CGGGGAGGGC
GCCGGCAATC CGGAACCGGA GCGGTTCGTC AGCATAGACG GGGCCTCGAC CGAAGACCTC
GACGACGCCT TTTTCCTTGA GCGCGACGGC GAAGGGTACC GCTTGACGCT CGCCCTGGCC
TGTCCGGTCT GGGGATGGCA CTTCGGCAGC CCGCTGGACC AGGCCGTGGC TGAGCGGGCG
ACAAGCCTGT ATCTCCCGGA AGGAGCGAGC CACATGCTCC CCGAACGGCT CGGCACCGGG
CTGTACAGTC TGCGCGCGGG ACAGACCCGG CCGGCCCTGC TGGTGGACAT GGCCCTGGAT
GCGCGTGGGA GCCTGCAGGA GGTCTCTCCC CGTCTGGGCT GGGTGCGGGT GGCGGAAAAT
CTGACCTATG CGGCGGTGGA AGAGGCTATG GCCGGGGGAA CGGCCCCGGC CATGCTCACC
GAGGCCCTGG ATCTGGCGAC CACCCTGCGC GACCGGCGGA TCCGCAACGG CGCCGTGATC
ATTGAGCGCC CGGAACCCGA GTTGGTCCTC GAAGATGAGG GGCAGACCAC CAGAGTCCGT
CTGGAGATGA AGGAACCGAC CCCGCAGGCC CAGTTGGTGG TCAGCGAATT CATGATCCTG
ACCAATCGTG CTGTGGCCCA GTGGGCCAAC GCTCAGGGGG TGAGCCTGGT CCACAGGACG
CAGGATATCA ATCTGGGAAA CGGCAGCGCG GGGATCTGGA GCGATCCGGC CCAGGCCTAC
CAGATCGTGC GGCAAATGGG GCCGTCCAAA CTCGCGTTGG CGCCCCAGCC CCATGCGAGT
CTTGGGGTCA ATGCCTATGT TCCGGTCACC TCCCCCTTGC GGCGTTATAC CGATTTTCTC
AATATGGCCC AGATCATGAC CTTTGTGCAG TCGGGCCAGG CGCGTCTGGA TGCGGCGGCC
TTTGAAGAGC TGTTGCCGTA TCTGAGCGCT CGACAGGACA ATGTGGCCCA GATCCAGCGG
TTTCGGCCAC GATACTGGAA ATTGGAGTAC CTGCGCCAGA ATCAGGACGC GTGGTGGCCG
GGTATTGTCG TCGAGGCCGG TCCCAAATTG ATCACGGTGG CGCTACCCCG GGAACAGGTC
CTTTTGCGGG GCAAACGCAA TCTTTTCGAT GAACCCCCCT CTGTCGGCGA GCGTCTTCTG
GTCCGGGTGG GCAAAATCGA CCCCTTGAAC AACGCAATCG AACTCATGGA AGTGCGGGAG
GAAACATGGG ACAATTCCTG TTTACAATAG
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| Protein sequence | MRHETQQITS GTVVEFMQSN QPIVAWVVDA QPNRLRVVTI NKRESKLPAA RVLPWSGPSY
TAAASREEFL ERLEQHQQRR VQLAAELEPE SLWDLVRDDV QRGTARWFAE LIWADPDADQ
IAAMGRALLE SKAHFKFVTP NFEIYSEEKV QLRLAEMEAA RRRQELIDHG HGFLKALWAK
RRGEETVLPE LSAELVDQLR QLLQRRMADP EDGETANVWR ELRKGLPDDP HLPLRLAQAW
GLVPEHYNVL LDRAGYSWGD GWSQAYTQEI ERLENVVGEG AGNPEPERFV SIDGASTEDL
DDAFFLERDG EGYRLTLALA CPVWGWHFGS PLDQAVAERA TSLYLPEGAS HMLPERLGTG
LYSLRAGQTR PALLVDMALD ARGSLQEVSP RLGWVRVAEN LTYAAVEEAM AGGTAPAMLT
EALDLATTLR DRRIRNGAVI IERPEPELVL EDEGQTTRVR LEMKEPTPQA QLVVSEFMIL
TNRAVAQWAN AQGVSLVHRT QDINLGNGSA GIWSDPAQAY QIVRQMGPSK LALAPQPHAS
LGVNAYVPVT SPLRRYTDFL NMAQIMTFVQ SGQARLDAAA FEELLPYLSA RQDNVAQIQR
FRPRYWKLEY LRQNQDAWWP GIVVEAGPKL ITVALPREQV LLRGKRNLFD EPPSVGERLL
VRVGKIDPLN NAIELMEVRE ETWDNSCLQ
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