| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2269 |
|---|
| Symbol | |
|---|
| ID | 8420127 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 2579036 |
|---|
| End bp | 2581492 |
|---|
| Gene Length | 2457 bp |
|---|
| Protein Length | 818 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 645038870 |
|---|
| Product | (Protein-PII) uridylyltransferase |
|---|
| Protein accession | YP_003199131 |
|---|
| Protein GI | 258406389 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2844] UTP:GlnB (protein PII) uridylyltransferase |
|---|
| TIGRFAM ID | [TIGR01693] [Protein-PII] uridylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACATCC CCGACCTCGA CGCCCCTTCC CGGGCCTGCT TGGCCCAATT TGACGCTGCT
CGCGCTCGAA GGGCCGGAGC CACGGATCCG AGCCGTGCTC CGGCCTTTTG TCGCGAACTT
TCAGCCTGGA TCGACGGGTA CTTCGAGGCC CGCATCGCTT CGATCTTCCC CGGCACCACG
ACTGCCGTGC TCGCCGTAGG GGGATATGGC CGCAGGGAAC TCGGTCTGGC CTCGGACATC
GACATCCTCT TGCTCTGTCC GCCGGACTCC CCCAAAGCCG CCGAAATCGC CGGGCCACTC
CTTCATCCTC TCTGGGACGC GAAGCTCGAC GTCGGCCATG CGGTGCGAAC CCTGGAAGAA
TGTCTGGCTT GGGCCTCCAG CGATCCCAGC GTCTTCGCCG CCCTGCTCGA CAGGCGGTAT
GTCGCCGGTC GCGAGGCACT GGCCAGAGAA CTCGACACCC ACCTCCTGGC CTTCACCCGG
CGAAGGGGCC GGGAGGTGTT TGAATGGCTG CGGACCCAGC GCCTCGAACG TGCCGCCCTG
CATGGAGACG CCAGCCAGGA ACTCGAACCG GATTGCAAAT ACGGCCTCGG TGGATTGCGC
GATTACCACC TCTGCCACTG GACCGGTCTG CTCTTCGAGG ACTCCGAGAT AGCCCTGCCT
CCGGCCATCA TTGAAGGGCG CGACTTTCTC CTGGCCGCCC GCAACGCCGT CACCCTGTGT
GACGGCCGCC CCCGAGACAC AATTCCGCTG GATCTTATTC CCCCGGTGGC CGAGGCCCTG
GCCGGAAACG ACATCCAAGA GGGAAATTCG CCAGTGGAGC GCTTCTATGC CCGCTTTCAG
GACCATGCCG CACGCCTCAA ACGCTACACC AACCATCTGG TGCTTCACGC CGCCGATCAA
TTCCCCTGCG CCGCTTCGGC CACATTGACC GGCGGCGGGC TGGAATTGCT GAAGGCAGAC
CTGGCCACAA AACGTCTGCC AAGCTGGCAG ACCCAGGAGA CCTTACGGCG TGACCCCCCG
CAAACCGCAA AGCAGCGCCG AGATGGGGCG GACATCGTAT TGGCCTGCCT GCAGGATCCC
GACCCGCTGC CGCTGTTGGA AATACTCCAC GAAACCGGCT TTCTCGCGGC CATTGTCCCC
CCGTGGGCAC AAGCGGCCCA CACCTTTGCC CTGGATGGGA GCCATCGCTA TCCCACGGGG
TGGCACAGCC TGCACAGCGT GGGGGCATTG GCCGAACTCA GCCGCGGCGA GGCGACTGTG
TTCGGCGATC CAGGGTATGA AACCCTTGCC AAAACCCCCG TTCTCAGACT CGCCGCGCTG
GTCCATGACA TTGGCAAAGG ACGTTCCGAT CATGCCCATG CCGGTGCCCG TCTTTTTCAA
CCTTTCCTGG ACCTTTTTGC CTTGACAGAG AAAGAGAAAC GGCTGCTTCG CTTTTTGATT
GAAAACCACC TCCTCCTTTC CACCACCGCC ACCCGCCGGG ACCTCCAAGA AGAGGAAACC
GTGCTGGCCT TCGCCAACCA GGTCGGGCAT CCAGCGACCC TGCACGCCCT GCTTCTGCTG
ACCTGGGCCG ACAGCCGGGC CAGTGGCTCC GCCGGTTGGA CTCCATGGGT CGCCAGTCTG
ATCAATGAAC TGGTGACCAA GACCAGTCGC CTGCTCGCCA GCGGCGAATT CGCCGACGGG
CACCATGCCC GCCGCCTCAG CCGCATCCGC GACCAGCTCC GATCCCGGAT GCCATGGCCG
TGCTCGGCGG AACACAAGGA AACCCTCCTG CAACGTCTGG GCTCGCGCTA CCTTCTGCAG
CACGATATCG ACAATGTTCT CGAACACCTG GACATGTACC GTGCCGCCAC TGAAAAGGCC
CTGCGGGGCC CTGTTGTGCG AGCCTGGCGC AGGCAGGGAG TGGACGGATG GCGCATCGAC
GCCCTGTGCC TCAAGGAGGA TCGGCTTTTC TCGGCCCTGG CCGGCGTGCT GACCCGGCAT
CAGGTCAATA TCCGGTCCGG GACGCTGCAC CGCTGGTTGG ACGGGACTAT CGTCGTTTCC
CTGCACACCG ACGAACCTCC GGATCCGTTG TACCCGGAGA AGTATTGGCA ACGGGTCCGG
TCAGACCTGG AAGCGGTCTT TTCCGCCAGG CTGGCGCTCG AATACCAGCT CGCCCGGGTG
GTGCCCAGAT TTGAGACTCC CCCTGGCTGT GCGGTCCAAC TTCGCCTCGA CAATGCGGGC
TCTGATTTTT TCACGGTCAT TGAAATCGCG GCCCCGGATC AGGCGGGGCT GCTCTACCGT
ATCGTCCACG CCCTGGAGGA GCTCAAATTG GAAGTCGCCT GGGCCTCGGT GCACACCGTC
AGCCACCATG TCACAGACAC CTTCTATGTC CGGGACCAAT GGGGAGAAAA ACTCACCGCT
GCCGAACAGG AACAGACGGT CCGGCAAGCA TTATACCATT GCCTCAAACC CACTTGA
|
|---|
| Protein sequence | MDIPDLDAPS RACLAQFDAA RARRAGATDP SRAPAFCREL SAWIDGYFEA RIASIFPGTT
TAVLAVGGYG RRELGLASDI DILLLCPPDS PKAAEIAGPL LHPLWDAKLD VGHAVRTLEE
CLAWASSDPS VFAALLDRRY VAGREALARE LDTHLLAFTR RRGREVFEWL RTQRLERAAL
HGDASQELEP DCKYGLGGLR DYHLCHWTGL LFEDSEIALP PAIIEGRDFL LAARNAVTLC
DGRPRDTIPL DLIPPVAEAL AGNDIQEGNS PVERFYARFQ DHAARLKRYT NHLVLHAADQ
FPCAASATLT GGGLELLKAD LATKRLPSWQ TQETLRRDPP QTAKQRRDGA DIVLACLQDP
DPLPLLEILH ETGFLAAIVP PWAQAAHTFA LDGSHRYPTG WHSLHSVGAL AELSRGEATV
FGDPGYETLA KTPVLRLAAL VHDIGKGRSD HAHAGARLFQ PFLDLFALTE KEKRLLRFLI
ENHLLLSTTA TRRDLQEEET VLAFANQVGH PATLHALLLL TWADSRASGS AGWTPWVASL
INELVTKTSR LLASGEFADG HHARRLSRIR DQLRSRMPWP CSAEHKETLL QRLGSRYLLQ
HDIDNVLEHL DMYRAATEKA LRGPVVRAWR RQGVDGWRID ALCLKEDRLF SALAGVLTRH
QVNIRSGTLH RWLDGTIVVS LHTDEPPDPL YPEKYWQRVR SDLEAVFSAR LALEYQLARV
VPRFETPPGC AVQLRLDNAG SDFFTVIEIA APDQAGLLYR IVHALEELKL EVAWASVHTV
SHHVTDTFYV RDQWGEKLTA AEQEQTVRQA LYHCLKPT
|
|---|
| |