| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2267 |
|---|
| Symbol | |
|---|
| ID | 8420125 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 2577414 |
|---|
| End bp | 2578631 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 645038868 |
|---|
| Product | ammonium transporter |
|---|
| Protein accession | YP_003199129 |
|---|
| Protein GI | 258406387 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0004] Ammonia permease |
|---|
| TIGRFAM ID | [TIGR00836] ammonium transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.828522 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCCTG CTGACACCGG TTTTATTCTC ATTTGTGCCG CCCTGGTCAT GCTCATGACC
CCAGGGCTGG CCCTGTTCTA CGCGGGCATG ACCCGCTCCA AAAACGTCCT CGGGACCCTG
ATGCAGAGCT TTATCGCCCT GGCCGTGGTC ACCGTGGTCT GGATTGTGTG GGGCTATTCC
CTGGCCTTTG GTTCGGACAT TTTCATGCTC ATCGGCGGAT TTGATTTTCT GGGCCTGCGC
AATGTGGGCA TGGAGCCCAA CCCGGATCTG GCCGGCAACA TTCCCCACCT GGCGTTCATG
ATTTTCCAAT GCATGTTCGC CATCATCACC CCGGCCCTGA TCAGCGGCGC CTTTGCCGAG
CGGATGCGCT TCAAGGGTTT TCTCGTCTTT ACAATTTTGT GGTCCACGTT TGTCTACAGC
CCGTTGTGCC ATTGGGTCTG GGGCGGCGGA TGGATGGGTG CCATGGGCGC CCTGGACTTT
GCTGGCGGCG CTGTGGTGCA CATGAGTTCA GGCAGCGCAG CACTGGCGGC CTGTCTCTTT
CTTGGTCCCC GAAAAGGCTA TGGGACCCGG TCGTTCATTC CCCACAATCT GCCCATGACC
ATCACCGGGG CGGCATTGCT TTGGTTCGGC TGGTTCGGTT TCAATGCCGG GAGCGCTCTG
GCTGCGGACG GTCTCGCCGC CCACGCCTTT GTGACCACCC ATATTGCTAC GGCCGCGGCG
GTGCTTGGCT GGCTGGTGGT CGAAACCCGG CACGCCGGCA AACCAACCAC ACTTGGCGCC
GTCTCCGGAG CCATCGCCGG ACTGGTGGCC ATTACTCCGG CAGCGGGCTT CGTCGGTCCC
ATCGGCGCCC TGATCATTGG CTTTGTCGGC GGCATGGCCT GCTACGGCAC CGTGTTGCTG
AAAAAAGCCT TCGGGTACGA CGATTCCCTT GATGTCGTCG GCATCCACGG CGCCGGGGGC
GTCTGGGGTG CGCTGGCAAC CGGCCTCTTC GCCCGTCTGA GCGTCAATCC TGGCGGAGCG
AACGGTCTGT TTTTTGGCAA TTTTTCCCAA TTCTGGATCC AGTTGATTTC GGTTGTCGCT
ACCTGCGTCT TCGCCTTTGC CCTGACCTGG ATCCTGCTGA AAATCACGGA TAGGCTGGTC
GGACTGCGTG TTTCCCCTGA AGAGGAGGAA CAGGGTCTGG ACATCAGCCA GCACAGCGAA
ACAGGGTACC AGTGGTAG
|
|---|
| Protein sequence | MSPADTGFIL ICAALVMLMT PGLALFYAGM TRSKNVLGTL MQSFIALAVV TVVWIVWGYS
LAFGSDIFML IGGFDFLGLR NVGMEPNPDL AGNIPHLAFM IFQCMFAIIT PALISGAFAE
RMRFKGFLVF TILWSTFVYS PLCHWVWGGG WMGAMGALDF AGGAVVHMSS GSAALAACLF
LGPRKGYGTR SFIPHNLPMT ITGAALLWFG WFGFNAGSAL AADGLAAHAF VTTHIATAAA
VLGWLVVETR HAGKPTTLGA VSGAIAGLVA ITPAAGFVGP IGALIIGFVG GMACYGTVLL
KKAFGYDDSL DVVGIHGAGG VWGALATGLF ARLSVNPGGA NGLFFGNFSQ FWIQLISVVA
TCVFAFALTW ILLKITDRLV GLRVSPEEEE QGLDISQHSE TGYQW
|
|---|
| |