| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2162 |
|---|
| Symbol | |
|---|
| ID | 8420013 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 2458701 |
|---|
| End bp | 2459588 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 645038756 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_003199024 |
|---|
| Protein GI | 258406282 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4120] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.596984 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTGGT ACGCTTTACT CGGCGCTGTC GAACAAGGGC TTGTCTTTGG TCTGATGGCG
CTTGGTGTTT ATCTCACCTT CCGCGTCCTC GATTTTCCGG ACCTTACCGT TGACGGCAGT
CTCCCCCTGG GAGCTGCGGT TTCGGCAACG GCCATCAGCA ACGGGGTCGA CCCGTACCTC
TCCCTCGTCT TCGCCTTTCT GGCCGGCTTC GGGGCCGGCA TGGTCACCGG ATTTCTGAAC
ACCAAGCTCA AAATTCTCCA CCTGCTGGCC TCCATCTTGT CCATGATCGC CCTGTATTCG
GTCAATATTC GGATCATGCA AGGGCCCAAC GTCTCACTTC TGGGCTCCGG GACAGTCTTC
GAGCCCTTAT ACGATCTGGG ACTGCCGGGG TATTTCGCTT CTCCGCTTCT TTTCATACTC
ATTGCCGCTA CTGCGGTCAT CGGGCTGATC TGGTTTTTGC ATACCGAATT CGGTCAGGCC
ATGCTCGCTA CGGGCGACAA TGCGCAGATG ATCACCAGCC AGGGCGTCAG CACGCATATG
ATGATCATCT TTGGTGTCGG CCTCTCCAAT GCCTTGGTCG CGTTCAGTGG GGCCCTCGTA
GCCCAGAACC AGGGCGCGGC AGACGTCAAC ATGGGTGTCG GTACGATCGT GGCCGGGTTG
GCCTCGGTCA TTGTCGGGGA AACCCTGTTT GGCACCCGCG GCATCGCGAG AACCATTACC
GCGGTCCTCT TGGGCTCCAT AGTCTACCGC ACGGCCATCG CCATGGCCTT GGGGCTCAAG
CTGGGCGATT TCAGTTTCAC ACCCAGCGAT CTCAATCTCA TCACGGCCGT GCTCGTTGTC
CTGGCGTTGA CAGCGCCGCA AATCAAACAG CGGCTGCGTA AATCATGA
|
|---|
| Protein sequence | MSWYALLGAV EQGLVFGLMA LGVYLTFRVL DFPDLTVDGS LPLGAAVSAT AISNGVDPYL
SLVFAFLAGF GAGMVTGFLN TKLKILHLLA SILSMIALYS VNIRIMQGPN VSLLGSGTVF
EPLYDLGLPG YFASPLLFIL IAATAVIGLI WFLHTEFGQA MLATGDNAQM ITSQGVSTHM
MIIFGVGLSN ALVAFSGALV AQNQGAADVN MGVGTIVAGL ASVIVGETLF GTRGIARTIT
AVLLGSIVYR TAIAMALGLK LGDFSFTPSD LNLITAVLVV LALTAPQIKQ RLRKS
|
|---|
| |