Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_2147 |
Symbol | |
ID | 8419998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 2443171 |
End bp | 2444334 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 645038741 |
Product | periplasmic binding protein |
Protein accession | YP_003199009 |
Protein GI | 258406267 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.985671 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.111935 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATTTCG TGTGGCTTTT TTTGAATTTC ATACCAAAAT GCGAGGACAA CGTGCGCTGT TTGCAATGGG CTTTCTGGTG TGTGGTTTTT GGTTGTCTTG TTCTGCTCAC TGTCCCGGCT CAAGCCGCCA AGACGGTGAC TGACGCCGCC GGTCGGCAGG TAACCCTGCC AGAAAACGTG GAGCGTGTTG TCTGCTCCGG GCCCGGCTGC CTTCGGCTGC TGACCTATTT GCAGGCCCAG GACCGGGTGG TCGCTGTGGA CGATGCTGAG ACCAAAGAAC GCGGTCTCGA TGCTAGACCG TATGCCTTGG CCAACCCCCA ATTTCAGACC ATGCCTGTTT TCGGGAGTTT TCGCGGTCAG GACAATCCCG AACGCCTTTT GACCCTGGAT CCCGGGCCCC AGGTGATATT CAAGACCTAT CCCCATATGG GTTTTGATCC CGAAGAACTC CAGGCAAAAA CCGGAATCCC GGTCGTCATC CTGCACTACG GCGATCTCGG CCCCCACCGG GCAACTCTTT TTTCCTCCCT GAAAATCATG GGCCGCGTCC TCGGCAAACC GCAGCGAGCC GAGGAGGTCA TCGGTTTCTT CTCCAAGCAC ATTCGCACCC TTGCTGAGCG CACGGCCTCC TTGTCCGGCA CCGAAACAGC CACCGCCTAT GTCGGGGGCG TGGCTTTCAA AGGCCCCCAC GGCTTCCAGT CCACAGAACC CGACTATCCC CCCTTCCAAT TCGTCAACGC CCGGAATGTC GTCGCCACCG CAGGCATTGA AGGCAACCAG CGCCAACACG CTGACATCGC CAAAGAGCAA CTGCTCGAGT GGGACCCGTC CGCCTGTTTT GTGGATCTGT CCACCTTACA ACTCGCCGGC ATGGGCGGCG CCCTGCATGA ACTGCGTCAC GATCCGGCCT ACCAGTTTCT TTCCGCTACC CAGGACAATA AGGTTTACGG CCTGTTGCCC TATAATTGGT ATACGAAGAA TTTCGGGTCT GTGCTGGCCA ACGCCTACTT TATCGGCAAA ACCCTCTACC CGCAGCGCTT CAAGGATATT AACCCCGCCG CCCAGGCCGA CCGGATCTAC ACCTTTTTGG TTGGCGCACC GGTTTTCGAC GAACTCAACC AGGGATTCGA TCAATTGGCC TTCACCAGGC TGGAGTGTCG CTGA
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Protein sequence | MHFVWLFLNF IPKCEDNVRC LQWAFWCVVF GCLVLLTVPA QAAKTVTDAA GRQVTLPENV ERVVCSGPGC LRLLTYLQAQ DRVVAVDDAE TKERGLDARP YALANPQFQT MPVFGSFRGQ DNPERLLTLD PGPQVIFKTY PHMGFDPEEL QAKTGIPVVI LHYGDLGPHR ATLFSSLKIM GRVLGKPQRA EEVIGFFSKH IRTLAERTAS LSGTETATAY VGGVAFKGPH GFQSTEPDYP PFQFVNARNV VATAGIEGNQ RQHADIAKEQ LLEWDPSACF VDLSTLQLAG MGGALHELRH DPAYQFLSAT QDNKVYGLLP YNWYTKNFGS VLANAYFIGK TLYPQRFKDI NPAAQADRIY TFLVGAPVFD ELNQGFDQLA FTRLECR
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