| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2111 |
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| Symbol | truA |
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| ID | 8419961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2401518 |
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| End bp | 2402282 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645038704 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_003198973 |
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| Protein GI | 258406231 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.110217 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCGCC TCAAACTCGT CGTTGCCTAC ACCGGAACCC ACTTTGCCGG CTGGCAATTA
CAGCCCCGGG ACCGCACGGT TCAAGGGTGC CTGGAAGACG CTTTCGCCAC CCTGTGCCAG
CACCCGCTTC GTGTCCACGG GGCGGGCCGA ACGGACAGCG GTGTGCACGC CGTCGGCCAG
GTCTGCCATT GCGATATCCC TCCGGAAAAA AACCATATCC CGTGGCAAAA AGCGCTCAAC
GCGATCCTGC CCAAAGATAT CGCTGTTTGC GAGGCCGCCT ATGTCAGAGA CGACTTCCAT
GCCCGCTTCA GCGCCCAAGC CAAGGAATAC GCCTACACCA TCTGGACAGA ACCGCGGTAT
GTCCTGCCCC AGCGACGGCC TCTTGTCTGG TCGGTGGGGC GGGTGGACGA GCACAAAATG
GCCGTGGCCG CCAGGATGTT GACTGGCACA TTCGATTTCG CCGCCTTTCA AAATACCGGG
ACCCCAGTGA GCCATACCGT GCGCACCGTT TATCACTTGG CGCCGGAACC CGGGGCAGCT
GGTAATGAAA GCACCTGGCT CTTCCATGCC GATGGATTTT TGAAACAGAT GGTCCGCAAT
ATAATGGGCT GCCTCGTAGC GGTGGGACGG AACAAGATCA GTGTAGACGA GGTCAAAATC
TTGCTCGAAG GGCAGAAACG GGAAATGGCC CCCGCGACGG CACCCCCCCA GGGATTGTGC
CTGCGGAAGG TCAAATACGG GGAACTTGCT GGGCCAGATC ACTGA
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| Protein sequence | MPRLKLVVAY TGTHFAGWQL QPRDRTVQGC LEDAFATLCQ HPLRVHGAGR TDSGVHAVGQ
VCHCDIPPEK NHIPWQKALN AILPKDIAVC EAAYVRDDFH ARFSAQAKEY AYTIWTEPRY
VLPQRRPLVW SVGRVDEHKM AVAARMLTGT FDFAAFQNTG TPVSHTVRTV YHLAPEPGAA
GNESTWLFHA DGFLKQMVRN IMGCLVAVGR NKISVDEVKI LLEGQKREMA PATAPPQGLC
LRKVKYGELA GPDH
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