Gene Dret_2047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2047 
Symbol 
ID8419892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2344877 
End bp2345059 
Gene Length183 bp 
Protein Length60 aa 
Translation table11 
GC content50% 
IMG OID645038635 
Productribosomal protein L30 
Protein accessionYP_003198909 
Protein GI258406167 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1841] Ribosomal protein L30/L7E 
TIGRFAM ID[TIGR01308] ribosomal protein L30, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000587812 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00892932 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGAAGA TCAAGCTTGT TCGCAGTAAG ATAGGCGCGT CTCCCAAACA GCGTCGGACC 
CTCGAAGCTT TGGGATTGCG CAAAATCCAC CAGGAACGCA GTATGGAATC CAGTAAGACT
GTGTTGGGCA TGGTGGACAA GGTTAAGCAC TTAGTAGAGG TCACAAGCGA TGAAACTGCA
TGA
 
Protein sequence
MLKIKLVRSK IGASPKQRRT LEALGLRKIH QERSMESSKT VLGMVDKVKH LVEVTSDETA