| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2032 |
|---|
| Symbol | |
|---|
| ID | 8419877 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 2331312 |
|---|
| End bp | 2332379 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 645038620 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_003198894 |
|---|
| Protein GI | 258406152 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.000150613 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0000241672 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATTG CCTTTATCAA TTCCACACAC CGTTGGGGCG GCGTCAAAAC CTGGATGCTG
GATGTCGGCC AGGCCCTTTC CGAACGCGGT CACGCGGTGA CGCTCTATGG CCGTCGCGGC
CCTTTTGTCG ACGCCTGGAC CGCAGCCGGG TTGCCTGGGA GGTCGGTCAC CTTTGGCAGC
GATTTCAGTC CCCGCAGTAT CGGTTTTTTT GTCCGCGACT TTCGCGCCTG GACCCCAGAT
CTGATTCTCG CCAATGTCGG CAAAGACCTG CGAACCGCCG GTATTGCCGC CACGTTGTGC
GGTATTCCCG TCATCCACCG TGTCGGTCTT CCGGGAGACA TGCGAGACAA ATGGAACGTG
CGCCTGGTTC ACCGCTTCCT CAAGCCATCC TATCTCGTTC CGTGTGAATT CATTAAAAAC
GGATTGCTGC GAGAGCTGTC GTTCCTGTCG CCGGAGGCGG TCACCTCCGT GCATACCGGG
AAGACTCCCG TGACAGTTCC CCCCGGCCAG GTCGCCGATC CACTGCGGCT GGTCATTTCC
AGCCAACTCA GCAAGGAAAA AGGCCACAGT GACCTTTTTC AGGCCTTGGC CCGGCTGCGT
GGGCAGCACC GCTTTGTCTG CCACATCCTC GGCACTGGCC CTTTCGAAAA CCAGCTCCAG
GACCTGGCTT CAGAGCTGGG ATTGGACCAC CATCTCATCT GGCACGGCTT CCAACCCGAC
GTGCGCCCCT TTTTGCGGCA AGCCGACATT TTTCTTCTCC CTTCATACCG AGAGGGATTG
CCCAACACCC TGCTGGAAGC GATGGCTGAA GGCCTTATCC CGTTGTCCAG AAATGTAGGC
GGCGTTCAAG AAGTCTGGCC GGATTCGCTC GCCCCTTTTC TCCTGCCAGA GGACAGCGAC
CCCGCCACAT GGGCCGCGGC GTTGAGTGAC CTTCTCGTCC AACCCGAAAA CCAGCTTCTG
CGCTACAAGG CTGCAAGCTG GCAAGCCTGC ACCGAGAACT TCACCCTGGC CACTCAGATC
TCCCGCCTCG AAGCCTGGCT GCAAGGACAA CGCGCCCCAA GATCCTGA
|
|---|
| Protein sequence | MRIAFINSTH RWGGVKTWML DVGQALSERG HAVTLYGRRG PFVDAWTAAG LPGRSVTFGS
DFSPRSIGFF VRDFRAWTPD LILANVGKDL RTAGIAATLC GIPVIHRVGL PGDMRDKWNV
RLVHRFLKPS YLVPCEFIKN GLLRELSFLS PEAVTSVHTG KTPVTVPPGQ VADPLRLVIS
SQLSKEKGHS DLFQALARLR GQHRFVCHIL GTGPFENQLQ DLASELGLDH HLIWHGFQPD
VRPFLRQADI FLLPSYREGL PNTLLEAMAE GLIPLSRNVG GVQEVWPDSL APFLLPEDSD
PATWAAALSD LLVQPENQLL RYKAASWQAC TENFTLATQI SRLEAWLQGQ RAPRS
|
|---|
| |