| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2014 |
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| Symbol | smpB |
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| ID | 8419859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2314763 |
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| End bp | 2315218 |
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| Gene Length | 456 bp |
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| Protein Length | 151 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 645038602 |
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| Product | SsrA-binding protein |
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| Protein accession | YP_003198876 |
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| Protein GI | 258406134 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0691] tmRNA-binding protein |
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| TIGRFAM ID | [TIGR00086] SsrA-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.960885 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAGGAA TAAAGGTTGT GGCCCAGAAC AGAAAGGCCC GCCACTATTT TGAATTTATC
GAATTCATCG AAGCCGGTCT GGTGCTGACA GGGTCGGAAG TCAAGTCCCT GCGCGCCGGG
CGCATCAGTT TCAAGGATGG CTATGTCCAG TTCCGCGGCG GAGAGGCCTT TCTGGTCGGT
GTCCATATTG CGCACTACGA AAATGCTGGA TATGCCGGAC ATGATCCGGA CCAGCCGCGC
AAATTGCTCC TGCACCGGCG TGAAATCGCC TCCTTGCGGG GGAAAGTGGA GCAAAAAGGC
CTGACGATGG TCCCCACAAA GGTGTATCTC AAAAACGGCC GCTTCAAGGT CGAGCTGGCT
TTGGCTCGGG GCAAGAATGT CCGGGATCGG CGTCAGGAAC TCAAACAAAA GGCCATTCAA
CGGGACATGG ACCGGGAAAT GGCCAAGGCC AAATAG
|
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| Protein sequence | MSGIKVVAQN RKARHYFEFI EFIEAGLVLT GSEVKSLRAG RISFKDGYVQ FRGGEAFLVG
VHIAHYENAG YAGHDPDQPR KLLLHRREIA SLRGKVEQKG LTMVPTKVYL KNGRFKVELA
LARGKNVRDR RQELKQKAIQ RDMDREMAKA K
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