Gene Dret_2005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2005 
Symbol 
ID8419850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2303031 
End bp2303570 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content58% 
IMG OID645038593 
Producthypothetical protein 
Protein accessionYP_003198867 
Protein GI258406125 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAG ACATCGATCT CAATAAAGCC GCGACCCTGG ATCCCTATCT GGGGCAGGAT 
TTCCTGACTT GGCTGTGGTT TAAAAGCGAG AAAAGTTCCG GCATGTTCCG TTCAACCTCC
GGTGAGGACT TTGCCCTGTA TATTGAGCAG CGCATTGCGG TCCAGGGCGG CGACGGCGAC
AATGTCGAGA CCGCGGTCTG CAGCGGGCCG CAGGCGGAAA TGCGCGAAGC CCGGCTGGGC
CTGACCACGG GCAAGAAGGT CAACCAGGCC CGGGTCCGCC TCGAACAAGA CGCCAACGAA
TGGCAATTCC AGCTCAAAGC GGAAGATTTC AGCTTCGGCA GCCTGAAGAC TCCGAAGGTC
GCAATGAAGG CCGAGGAGGG TGACGACCCG GACGGGCCGT TTTATGAAAA GATGTATCTG
ATTGAAAAAG CGCTGGAATT TTTGGACGGA CTCTATCTGC AATTCCTGCA GACCCGCCTG
GGCCCTGAAT GGCGCGAGGA GATGCTCGCC CTGCGGTCCT GGATCATGGA GCAGGACTAG
 
Protein sequence
MTEDIDLNKA ATLDPYLGQD FLTWLWFKSE KSSGMFRSTS GEDFALYIEQ RIAVQGGDGD 
NVETAVCSGP QAEMREARLG LTTGKKVNQA RVRLEQDANE WQFQLKAEDF SFGSLKTPKV
AMKAEEGDDP DGPFYEKMYL IEKALEFLDG LYLQFLQTRL GPEWREEMLA LRSWIMEQD