| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2001 |
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| Symbol | |
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| ID | 8419846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2298386 |
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| End bp | 2298889 |
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| Gene Length | 504 bp |
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| Protein Length | 167 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 645038589 |
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| Product | hypothetical protein |
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| Protein accession | YP_003198863 |
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| Protein GI | 258406121 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGAAT CGATAGCCGC AACAAAGATG GCTCTATACA TGACACAACT CCCATCCAAG
TTCAGAAGAC CCAAACTAGG CTTTACCCTG CTGGAGGTCA TTGCCGTGCT GGTGCTTCTG
GGGGTGCTGG CGACCCTGGC GCTGCCGCGA CTTTCCGGGC TATACAGCTC GTTGGACGTG
CAAGAAATCC GGGACCAGTT CATCGGTGAT TTGCGTCAGG CCAGGTCCAT GGCTCAGGGG
TGTGCGAAAA CTGTAGTTAA TGTTACGACC AGTGGGAATG ATTGGTCGGT TGCCCCAGAC
CCGGATGATT GCGGGTACTC TATTTCCAGA ACAAATCTCC CTGATGAGAT CGCAATTGCC
ATAGACGGAC CAATCTTATT TCAATACCCG GAAGGCAATT TATCGGGCAG TTCGGTCACG
ATCACGCTCA GTGCAAATGG TGATAGCCAG CACGTCTGCG TAGATGGCTC GACAGGGGCA
ATACAGCGCC GGGCTTGCAA TTAG
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| Protein sequence | MQESIAATKM ALYMTQLPSK FRRPKLGFTL LEVIAVLVLL GVLATLALPR LSGLYSSLDV
QEIRDQFIGD LRQARSMAQG CAKTVVNVTT SGNDWSVAPD PDDCGYSISR TNLPDEIAIA
IDGPILFQYP EGNLSGSSVT ITLSANGDSQ HVCVDGSTGA IQRRACN
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