| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1969 |
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| Symbol | |
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| ID | 8419814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2256720 |
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| End bp | 2258168 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645038557 |
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| Product | potassium uptake protein, TrkH family |
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| Protein accession | YP_003198831 |
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| Protein GI | 258406089 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
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| TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.938293 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.091936 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTGGG GGTACACGCT GCAGGTCGTC GGGCTGGTGA TTCTCTTCAC CGGCTTGTCC
ATGCTCGTCC CGCTGGGATT CGGATTGTAC TACAGTGACG GCTCTGTTTT GCCCTTGTTG
GAGTCGATCG CCCTGACCTG TTCCGTGGGC CTGGGGATGT ACCTGGCGCT GCGCCAATAC
CAGGTCAAGG TCATGACCCA CCGCGAAGGG ATGGCTGTGG TCGCCCTCGG GTGGGCCGCG
GCGGGCATTT TTGGCGGCAT GCCCTATTTC TTCGCGGACA TCTTCCCGTC CTTTATCGAC
TGCATCTTTG AGTCCATGTC CGGGTTTACG ACGACCGGGG CCTCGGTTCT TTCCGACATC
GAAGCTCTGC CCGAAGGCAT CTTGATGTGG CGCAGCTTGA CCCATTGGCT TGGCGGGATG
GGGATCATTG TCCTCTCGCT GGCTATTTTG CCCTTTCTCG GTGTCGGCGG GATGCAGCTC
TACAAGGCCG AAGTGCCGGG CCCCACCCCG GACAAACTGC GTCCGCGGAT CAAGGACACG
GCCAAATTGC TGTGGCAGGT CTATGCCCTG TTCTCTTTTC TGGAATTCAT CCTTCTGCTC
GGCGGGGGGA TGGATGTCTT TGATTCCCTG TGTCACACCT TCGGAACCAT GGCCACCGGC
GGCTTCTCGA CCAAAAACAC CTCCATCGCC GCCTTCGACT CTGTCTATAT TGATACGGTG
ATTATCGTTT TCATGTTCAT CGCCGGAACC AACTTCGCCC TGCACCTCCA ACTGCTTCGC
GGGAAACCGC TGGCGCTGTG GCGGGACCCG GAGTTCCGGT TTTTCTTTCT GCTGATCTGC
GTTTGCACGC TCTTGAGCAC GGTCTTCGTG TACGGGGATA TCTATGCCTC CTGGGGGCTT
TCGCTCAGGC ACGCGGCCTT TCAGGTCATC TCTATTGTGA CCACCACCGG CTATGCCACC
GCCGACTATG AACTCTGGGC GCCTCTGCCC CAGGCGCTTC TCGTTTTCTG CATGTTCGTC
GGCGGCTGTG CCGGGTCCAC AGGCGGCGGG ATCAAAGGCA TGCGCGTGAT TTTACTTGTC
AAACAGTCCT ACCGGGAATT GATCCGCCTG ATCCACCCCA GGGCCGTTGT TCCGGTCAAG
CTCGGTGGAC GCTCGGTCCC GGAAGGGATC CTCGGCGGTG TCTGGGGCTT TTTCATCCTC
TTTTTGATGC TTTTTCTCCT CTCGGCCCTC GCCCTTGCGG CTATGGGCGT GGACATCATG
ACCTCCTTTG CCGCGGTGGT GGCCTGTATC GGCAATATCG GCCCCGGTCT CGGCGATGTC
GGCCCCACGG ACAATTATGC CTCCCTGCCG CTGGCTGCCA AATCTATCCT CTCCTTTTGC
ATGCTTCTTG GGCGCCTGGA AATCTATACG GTCATTATCC TTTTGGTCCC TGAATTCTGG
CGCAAATAG
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| Protein sequence | MRWGYTLQVV GLVILFTGLS MLVPLGFGLY YSDGSVLPLL ESIALTCSVG LGMYLALRQY
QVKVMTHREG MAVVALGWAA AGIFGGMPYF FADIFPSFID CIFESMSGFT TTGASVLSDI
EALPEGILMW RSLTHWLGGM GIIVLSLAIL PFLGVGGMQL YKAEVPGPTP DKLRPRIKDT
AKLLWQVYAL FSFLEFILLL GGGMDVFDSL CHTFGTMATG GFSTKNTSIA AFDSVYIDTV
IIVFMFIAGT NFALHLQLLR GKPLALWRDP EFRFFFLLIC VCTLLSTVFV YGDIYASWGL
SLRHAAFQVI SIVTTTGYAT ADYELWAPLP QALLVFCMFV GGCAGSTGGG IKGMRVILLV
KQSYRELIRL IHPRAVVPVK LGGRSVPEGI LGGVWGFFIL FLMLFLLSAL ALAAMGVDIM
TSFAAVVACI GNIGPGLGDV GPTDNYASLP LAAKSILSFC MLLGRLEIYT VIILLVPEFW
RK
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